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GEO accession:
Sample GSM314295
Query DataSets for GSM314295
Status
Public on Mar 23, 2015
Title
1994_p_2
Sample type
RNA
Source name
biopsy, prior to treatment, chemoradiotherapy
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, chemoradiotherapy
Data processing
global median normalization
Submission date
Aug 21, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
16968.8047
137.4831
1002
959.0107
7.77
1003
20
0.162
1004
27.6444
0.224
1005
26.55
0.2151
1006
42.9836
0.3483
1007
32.1176
0.2602
1008
14956.7373
121.1811
1009
443.4483
3.5929
1010
649.76
5.2644
1011
114.6479
0.9289
1012
175.4366
1.4214
1013
76.4203
0.6192
1014
42.8136
0.3469
1015
15929.708
129.0642
1016
74.5231
0.6038
1017
32.8545
0.2662
1018
15.4792
0.1254
1019
25.7174
0.2084
1020
54.8727
0.4446
Total number of rows:
54359
Table truncated, full table size
1179 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM314295.txt.gz
2.3 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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