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GEO accession:
Sample GSM314298
Query DataSets for GSM314298
Status
Public on Mar 23, 2015
Title
2034_p_1
Sample type
RNA
Source name
biopsy, prior to treatment, chemoradiotherapy
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, chemoradiotherapy
Data processing
global median normalization
Submission date
Aug 21, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
22309.5254
209.8217
1002
1094.3024
10.2919
1003
1.5862
0.0149
1004
16.9697
0.1596
1005
-2.2195
-0.0209
1006
38.7174
0.3641
1007
49.1035
0.4618
1008
25185.2
236.8676
1009
488.0225
4.5899
1010
1026.5
9.6543
1011
128.0282
1.2041
1012
151.6143
1.4259
1013
56
0.5267
1014
9.3684
0.0881
1015
24278.6328
228.3413
1016
296.2329
2.7861
1017
30.2545
0.2845
1018
14.1895
0.1335
1019
21.3192
0.2005
1020
42.0426
0.3954
Total number of rows:
54359
Table truncated, full table size
1173 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM314298.txt.gz
2.4 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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