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Sample GSM3156 Query DataSets for GSM3156
Status Public on Jul 01, 2003
Title Gastrointestinal Stroma Tumor: patient GIST-15, tumor tissue, 1st repetition [2]
Sample type RNA
 
Source name Gastrointestinal Stroma Tumor
Organism Homo sapiens
Extracted molecule total RNA
 
Description patientid=GIST-15
sex=f
age=45
birthyear=1952
stage=primary
type=GIST
tumorsite=stomach
survival_months=31
died=no
tumorsize.cm=4
CD34_expression=yes
SMA_expression=yes
S100_expression=no
mitoses_in_10_hpf=0
mucosal_ulceration=yes
metastases_or_recurrence=no
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice)
Keywords = Gastrointestinal Stroma Tumor from stomach
Lot batch = filter=3623154 reuse=4 date=03-Feb-2001
 
Submission date Dec 12, 2002
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL10
Series (1)
GSE112 Distinctive gene expression patterns in gastrointestinal stromal tumors identified with cDNA arrays

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-BKD_RAW

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 655258 677329 -22071
2 677443 677329 114
3 936737 677329 259408
4 635312 677329 -42017
5 697442 677329 20113
6 7784542 677329 7107213
7 1348080 677329 670751
8 655593 677329 -21736
9 647290 677329 -30039
10 1293094 677329 615765
11 728660 677329 51331
12 910648 677329 233319
13 1497057 677329 819728
14 1037316 677329 359987
15 838637 677329 161308
16 426983 677329 -250346
17 3711313 779689 2931624
18 745120 779689 -34569
19 1476952 779689 697263
20 562952 779689 -216737

Total number of rows: 36864

Table truncated, full table size 1035 Kbytes.




Supplementary data files not provided

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