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GEO accession:
Sample GSM319524
Query DataSets for GSM319524
Status
Public on Mar 29, 2009
Title
P09_1290P1H
Sample type
RNA
Source name
Liver
Organism
Homo sapiens
Characteristics
Anatomical sites: Liver
gender: F
age: 50-59
TNM: G4
Extracted molecule
total RNA
Extraction protocol
Qiagen RNEasy kit
Label
biotin
Label protocol
Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
Hybridization protocol
Affymetrix GeneChip standard protocol
Scan protocol
Affymetrix GeneChip standard protocol
Description
Hepatocellular Carcinoma
Data processing
Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
Submission date
Sep 10, 2008
Last update date
Mar 27, 2009
Contact name
Ljubomir Buturovic
Organization name
Pathwork Diagnostics
Department
Application Development
Street address
1196 Borregas Avenue
City
Sunnyvale
State/province
CA
ZIP/Postal code
94089
Country
USA
Platform ID
GPL7280
Series (1)
GSE12630
Gene expression profiles of poorly differentiated, undifferentiated and metastatic cancers
Data table header descriptions
ID_REF
VALUE
normalized values
Data table
ID_REF
VALUE
AFFX-BioB-3_at
0.81547779
AFFX-BioB-5_at
0.823703213
AFFX-BioB-M_at
0.959381194
AFFX-BioC-3_at
1.31104578
AFFX-BioC-5_at
1.192224807
AFFX-BioDn-3_at
1.678848371
AFFX-BioDn-5_at
1.547674719
AFFX-CreX-3_at
2.158092701
AFFX-CreX-5_at
2.128079361
AFFX-DapX-3_at
0.8043073
AFFX-DapX-5_at
0.585659693
AFFX-DapX-M_at
0.769344963
AFFX-HSAC07/X00351_3_at
1.95962568
AFFX-HSAC07/X00351_5_at
1.696126733
AFFX-HSAC07/X00351_M_at
1.832349706
AFFX-HUMGAPDH/M33197_3_at
2.04074255
AFFX-HUMGAPDH/M33197_5_at
2.008508667
AFFX-HUMGAPDH/M33197_M_at
2.029003984
AFFX-HUMISGF3A/M97935_3_at
1.161805807
AFFX-HUMISGF3A/M97935_5_at
0.786411023
Total number of rows:
22300
Table truncated, full table size
484 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM319524.CEL.gz
2.0 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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