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GEO accession:
Sample GSM319527
Query DataSets for GSM319527
Status
Public on Mar 29, 2009
Title
P09_1625P1H
Sample type
RNA
Source name
Prostate
Organism
Homo sapiens
Characteristics
Anatomical sites: Prostate
gender: M
age: 60-69
TNM: Gleason 7
Extracted molecule
total RNA
Extraction protocol
Qiagen RNEasy kit
Label
biotin
Label protocol
Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
Hybridization protocol
Affymetrix GeneChip standard protocol
Scan protocol
Affymetrix GeneChip standard protocol
Description
Adenocarcinoma
Data processing
Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
Submission date
Sep 10, 2008
Last update date
Mar 27, 2009
Contact name
Ljubomir Buturovic
Organization name
Pathwork Diagnostics
Department
Application Development
Street address
1196 Borregas Avenue
City
Sunnyvale
State/province
CA
ZIP/Postal code
94089
Country
USA
Platform ID
GPL7280
Series (1)
GSE12630
Gene expression profiles of poorly differentiated, undifferentiated and metastatic cancers
Data table header descriptions
ID_REF
VALUE
normalized values
Data table
ID_REF
VALUE
AFFX-BioB-3_at
0.772631887
AFFX-BioB-5_at
0.803013105
AFFX-BioB-M_at
0.902692535
AFFX-BioC-3_at
1.272123587
AFFX-BioC-5_at
1.150884186
AFFX-BioDn-3_at
1.677208566
AFFX-BioDn-5_at
1.528032957
AFFX-CreX-3_at
2.147169541
AFFX-CreX-5_at
2.140356085
AFFX-DapX-3_at
0.879627833
AFFX-DapX-5_at
0.560866389
AFFX-DapX-M_at
0.794849893
AFFX-HSAC07/X00351_3_at
2.058965443
AFFX-HSAC07/X00351_5_at
1.822961302
AFFX-HSAC07/X00351_M_at
1.95467567
AFFX-HUMGAPDH/M33197_3_at
1.862644686
AFFX-HUMGAPDH/M33197_5_at
1.782362637
AFFX-HUMGAPDH/M33197_M_at
1.859601606
AFFX-HUMISGF3A/M97935_3_at
0.949742124
AFFX-HUMISGF3A/M97935_5_at
0.249764393
Total number of rows:
22300
Table truncated, full table size
484 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM319527.CEL.gz
2.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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