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GEO accession:
Sample GSM319544
Query DataSets for GSM319544
Status
Public on Mar 29, 2009
Title
J06_0333P2A
Sample type
RNA
Source name
Kidney
Organism
Homo sapiens
Characteristics
Anatomical sites: Adrenal gland
gender: F
age: 50-59
TNM: -
Extracted molecule
total RNA
Extraction protocol
Qiagen RNEasy kit
Label
biotin
Label protocol
Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
Hybridization protocol
Affymetrix GeneChip standard protocol
Scan protocol
Affymetrix GeneChip standard protocol
Description
Metastatic renal cell carcinoma
Data processing
Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
Submission date
Sep 10, 2008
Last update date
Mar 27, 2009
Contact name
Ljubomir Buturovic
Organization name
Pathwork Diagnostics
Department
Application Development
Street address
1196 Borregas Avenue
City
Sunnyvale
State/province
CA
ZIP/Postal code
94089
Country
USA
Platform ID
GPL7280
Series (1)
GSE12630
Gene expression profiles of poorly differentiated, undifferentiated and metastatic cancers
Data table header descriptions
ID_REF
VALUE
normalized values
Data table
ID_REF
VALUE
AFFX-BioB-3_at
1.017712134
AFFX-BioB-5_at
1.051408294
AFFX-BioB-M_at
1.157190657
AFFX-BioC-3_at
1.517084565
AFFX-BioC-5_at
1.429979493
AFFX-BioDn-3_at
2.040058509
AFFX-BioDn-5_at
1.85582996
AFFX-CreX-3_at
2.468014517
AFFX-CreX-5_at
2.45377498
AFFX-DapX-3_at
1.32910379
AFFX-DapX-5_at
1.110046302
AFFX-DapX-M_at
1.332826693
AFFX-HSAC07/X00351_3_at
2.349615189
AFFX-HSAC07/X00351_5_at
1.724986651
AFFX-HSAC07/X00351_M_at
2.005441796
AFFX-HUMGAPDH/M33197_3_at
2.301736499
AFFX-HUMGAPDH/M33197_5_at
1.910678978
AFFX-HUMGAPDH/M33197_M_at
2.093491679
AFFX-HUMISGF3A/M97935_3_at
1.001292266
AFFX-HUMISGF3A/M97935_5_at
0.178449434
Total number of rows:
22300
Table truncated, full table size
486 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM319544.CEL.gz
1.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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