NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM33931 Query DataSets for GSM33931
Status Public on Mar 31, 2005
Title TF1_104vsMJ90_2
Sample type RNA
 
Channel 1
Source name TF1 PDL104
Organism Homo sapiens
Extracted molecule total RNA
 
Channel 2
Source name MJ90
Organism Homo sapiens
Extracted molecule total RNA
 
 
Description Expression profiles in normal fibroblasts before (MJ90) and after immortalization with hTERT transfection (TF1).
Keywords = fibroblast
Keywords = cellular immortalization
Keywords = hTERT
 
Submission date Oct 28, 2004
Last update date Mar 13, 2006
Contact name Keiko Hiyama
E-mail(s) khiyama@hiroshima-u.ac.jp
Phone 81-82-257-5841
Fax 81-82-256-7105
Organization name Hiroshima University
Department Research Institute for Radiation Biology and Medicine
Lab Dept. Translational Cancer Research
Street address 1-2-3 Kasumi, Minami-ku
City Hiroshima
State/province Hiroshima
ZIP/Postal code 734-8553
Country Japan
 
Platform ID GPL1530
Series (1)
GSE1900 Immortalization of normal human cells

Data table header descriptions
ID_REF
FLAG Quality of signal (normal or abnormal)
Spot Mean Intensity (cy3) Raw signal intensity of cy3
Spot Mean Intensity (cy5) Raw signal intensity of cy5
Background Median Intensity (cy3) Background signal of cy3
Background Median Intensity (cy5) Background signal of cy5
VALUE same as UNF_VALUE but with flagged values removed
UNF_VALUE Log2(Cy3/Cy5) with global normalization

Data table
ID_REF FLAG Spot Mean Intensity (cy3) Spot Mean Intensity (cy5) Background Median Intensity (cy3) Background Median Intensity (cy5) VALUE UNF_VALUE
1 NORMAL 668.518 319.577 179 167 1.290196392 1.290196392
2 NORMAL 442.993 319.259 192 170 0.358201188 0.358201188
3 NORMAL 363.091 261.2954 184 175 0.661709259 0.661709259
4 NORMAL 449.308 335.932 153 175 0.489018339 0.489018339
5 NORMAL 1427.707 2143.564 151 185 -1.008996819 -1.008996819
6 NORMAL 468.244 300.0305 194 181 0.812500749 0.812500749
7 NORMAL 642.745 496.321 218 168.5 -0.017939327 -0.017939327
8 NORMAL 351.647 312.3459 204 177 -0.266127158 -0.266127158
9 NORMAL 506.241 406.083 189 184.5 0.126104019 0.126104019
10 NORMAL 542.511 982.985 173 173 -1.523905894 -1.523905894
11 NORMAL 669.496 714.135 171 162.5 -0.537760083 -0.537760083
12 NORMAL 556.153 502.435 145 164 -0.110831436 -0.110831436
13 NORMAL 1569.068 3471.72 167 170 -1.627289473 -1.627289473
14 NORMAL 2198.632 4378.53 158 173 -1.434899607 -1.434899607
15 NORMAL 409.128 276.9774 173 158 0.597253553 0.597253553
16 NORMAL 442.489 279.9098 159 134.5 0.571540236 0.571540236
17 NORMAL 350.221 176.4504 169.5 133 1.664694779 1.664694779
18 NORMAL 519.564 626.759 148 134 -0.798899509 -0.798899509
19 NORMAL 468.756 546.626 151 124 -0.803090174 -0.803090174
20 NORMAL 371.037 224.8889 126 129.5 0.969478292 0.969478292

Total number of rows: 21168

Table truncated, full table size 1291 Kbytes.




Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap