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Platform GPL1530 Query DataSets for GPL1530
Status Public on Oct 28, 2004
Title RIKEN human 21K array
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
 
Description This array was made in the laboratory of Dr. Yasushi Okazaki at the Riken Genome Science Center, Yokohama Institute in Japan. The array contains 21,168 spots including 20784 spots of human cDNA clones purchased from ResGen™ (Invitrogen Corporation, Carlsbad, CA, USA) and the remaining spots are the internal and exogenous controls spotted on every subgrid as positive and negative controls.
Keywords = RIKEN human 21K cDNA
 
Web link http://microarray.vai.org/clones/
Contributor(s) Hiyama K, Otani K, Ohtaki M, Satoh K, Okazaki Y, Hayashizaki Y, Tanimoto K, Nishiyama M
Submission date Oct 24, 2004
Last update date Jun 21, 2006
Contact name Keiko Hiyama
E-mail(s) khiyama@hiroshima-u.ac.jp
Phone 81-82-257-5841
Fax 81-82-256-7105
Organization name Hiroshima University
Department Research Institute for Radiation Biology and Medicine
Lab Dept. Translational Cancer Research
Street address 1-2-3 Kasumi, Minami-ku
City Hiroshima
State/province Hiroshima
ZIP/Postal code 734-8553
Country Japan
 
Samples (52) GSM33930, GSM33931, GSM33932, GSM33933, GSM33934, GSM33935 
Series (2)
GSE1900 Immortalization of normal human cells
GSE2454 Chemosensitivity prediciton in esophageal cancer cell line using cDNA microarray

Data table header descriptions
ID
block_No. 48 subgrids containig 441 spots
row 21 rows in each block
column 21 columns in each block
CLONE ID Clone identifier of Research Genetics http://microarray.vai.org/clones/
GB_ACC Representative GenBank accession number;
SPOT_ID

Data table
ID block_No. row column CLONE ID GB_ACC SPOT_ID
1 1 1 1 511428 AA126009
2 1 1 2 525518 AA064638
3 1 1 3 234562 H78241
4 1 1 4 823756 AA490238
5 1 1 5 121621 T97593
6 1 1 6 563201 AA114107
7 1 1 7 74593 T58251
8 1 1 8 741139 AA402754
9 1 1 9 194364 H50677
10 1 1 10 358457 W96058
11 1 1 11 204148 H55921
12 1 1 12 687990 AA236957
13 1 1 13 34795 R45111
14 1 1 14 32609 R43734
15 1 1 15 292306 N68256
16 1 1 16 82879 T69284
17 1 1 17 470393 AA031514
18 1 1 18 813279 AA455941
19 1 1 19 809627 AA458503
20 1 1 20 244189 N52474

Total number of rows: 21168

Table truncated, full table size 609 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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