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Sample GSM3935930 Query DataSets for GSM3935930
Status Public on Feb 01, 2021
Title kidney_Qishen Yiqi Dripping Pill-treated_rep3 [D10]
Sample type RNA
 
Source name Qishen Yiqi Dripping Pill-treated rats, 17week
Organism Rattus norvegicus
Characteristics strain background: Sprague Dawley
age: 17 week
treatment: Qishen Yiqi Dripping Pill-treated
tissue: kidney
Extracted molecule total RNA
Extraction protocol Total tissue RNA was extracted using total RNA Isolation Kit (mirVanaTM, ABI).
Label biotin
Label protocol biotin
 
Hybridization protocol The sample preparation and hybridation of each cDNAs on Affymetrix GeneChip® Mouse Gene 2.0 ST arrays based on manufacturer's instruction.
Scan protocol Arrays were scanned using the GeneChip® Scanner 3000 Affymetrix)
Description gene expression data from kidney of Qishen Yiqi Dripping Pill-treated rat
Data processing All arrays were uploaded into Genespring v12.5 (Agilent Tchnologies, USA) for data normalization, quality control and first-pass analysis. Differentially expressed genes were then identified through fold change as well as P value calculated with t-test. The threshold set for differentially regulated genes was a fold change>1.5 and a P value<0.05.
 
Submission date Jul 10, 2019
Last update date Feb 02, 2021
Contact name Qian Zhang
Organization name Peking Union Medical College Hospital
Street address No. 1 Shuaifuyuan, Dongcheng District
City Beijing
ZIP/Postal code 100730
Country China
 
Platform ID GPL17117
Series (1)
GSE134072 Gene expression alternations in Qishen Yiqi Dripping Pill-treated rats kidney

Data table header descriptions
ID_REF
VALUE log2 RMA-normalized data

Data table
ID_REF VALUE
17600001 3.398523
17600003 5.016595
17600005 4.380359
17600007 3.125998
17600009 2.862542
17600011 5.158937
17600013 5.813148
17600015 2.096105
17600017 1.974619
17600019 3.658832
17600021 3.101678
17600023 5.519525
17600025 5.990434
17600027 5.1424
17600029 3.120913
17600031 5.025316
17600033 3.919594
17600035 3.402751
17600037 3.598057
17600039 2.020286

Total number of rows: 36685

Table truncated, full table size 641 Kbytes.




Supplementary file Size Download File type/resource
GSM3935930_D10_RaGene-2_0-st_.CEL.gz 8.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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