GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM41338
Query DataSets for GSM41338
Status
Public on Feb 09, 2006
Title
olive
Sample type
RNA
Source name
liver from animals lacking apolipoprotein E
Organism
Mus musculus
Extracted molecule
total RNA
Description
Animals were fed a high fat diet enriched in olive oil. RNA was extracted using a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = liver. High fat diet. Olive oil.
Submission date
Feb 06, 2005
Last update date
May 29, 2005
Contact name
Jesus Osada
E-mail(s)
josada@unizar.es
Phone
34-976-761-644
Organization name
Universidad de Zaragoza
Street address
Miguel Servet, 177
City
Zaragoza
ZIP/Postal code
E-50013
Country
Spain
Platform ID
GPL339
Series (1)
GSE2261
effect of types of olive oil on hepatic gene expression
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
45.5
P
0.002275
AFFX-BioB-M_at
92.1
P
0.000169
AFFX-BioB-3_at
44.1
P
0.003595
AFFX-BioC-5_at
127.7
P
0.000147
AFFX-BioC-3_at
85.2
P
0.000169
AFFX-BioDn-5_at
100.5
P
0.000169
AFFX-BioDn-3_at
771.6
P
0.00011
AFFX-CreX-5_at
1067.5
P
0.000052
AFFX-CreX-3_at
1838.4
P
0.000044
AFFX-DapX-5_at
1.5
A
0.544587
AFFX-DapX-M_at
10.1
A
0.239063
AFFX-DapX-3_at
0.7
A
0.978098
AFFX-LysX-5_at
1.8
A
0.60308
AFFX-LysX-M_at
6.8
A
0.672935
AFFX-LysX-3_at
5.8
A
0.227636
AFFX-PheX-5_at
0.8
A
0.945787
AFFX-PheX-M_at
0.8
A
0.963431
AFFX-PheX-3_at
11.1
A
0.39692
AFFX-ThrX-5_at
4.6
A
0.645547
AFFX-ThrX-M_at
3.8
A
0.686277
Total number of rows:
22690
Table truncated, full table size
605 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
