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Sample GSM419948 Query DataSets for GSM419948
Status Public on Feb 01, 2010
Title 251186836388
Sample type RNA
 
Channel 1
Source name 191-cy3
Organism Rattus norvegicus
Characteristics label: 191-cy3
extract: 191
sample: T191
subject: CMO 191
tissue: thoracic aorta
origin: control mother
extract_amount: 5.1
extract_concentration: 176.0
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy3
Label protocol cRNA Agilent
 
Channel 2
Source name 197-cy5
Organism Rattus norvegicus
Characteristics label: 197-cy5
extract: 197
sample: 197
subject: DMO 197
tissue: thoracic aorta
origin: diabetic mother
extract_amount: 5.3
extract_concentration: 50.0
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy5
Label protocol cRNA Agilent
 
 
Hybridization protocol Agilent : 750.0 ng at 60 degree_C during 16 hours
Scan protocol Scanned on an GenePix 4000B fluorescent scanner. Image intensity data were extracted with GenePix Pro 6.0 analysis software.
Description 191-cy3 vs 197-cy5
Date:2005/10/03
Data processing Interslide norm. : quantile, Intraslide norm. : loess, Background norm. : Kooperberg, Software used : limmagui --> VALUE data obtained from log of processed Red signal/processed Green signal.
 
Submission date Jun 23, 2009
Last update date Nov 26, 2009
Contact name Celine Fassot-Lucht
E-mail(s) celine.fassot@inserm.fr
Organization name INSERM U1083
Department BNMI
Street address Rue Haute de Reculée
City Angers
ZIP/Postal code 49045 cedex 01
Country France
 
Platform ID GPL890
Series (1)
GSE16750 Aortic gene expression profile of rats exposed in utero to maternal diabetes

Data table header descriptions
ID_REF
VALUE log2(diabetic/control) per feature (loess)

Data table
ID_REF VALUE
5043 -0.253957890514105
4938 0.146870723162031
4833 0.536381499146986
4728 -0.48381463943867
4623 0.456978723090884
4518 0.366165101362098
4413 0.174458594727654
4308 0.0586909452246438
4203 -0.750507210112142
4098 -0.960676089310088
3993 0.332672659816922
3888 0.365606213510484
3783 0.00554798893057118
3678 -0.0428360246835897
3573 0.318550480828241
3468 -0.675868847713227
3363 0.5934731845766
3258 -0.571254111424443
3153 0.332826876077704
3048 0.0732993317384762

Total number of rows: 22575

Table truncated, full table size 530 Kbytes.




Supplementary file Size Download File type/resource
GSM419948.gpr.gz 3.1 Mb (ftp)(http) GPR
Processed data included within Sample table

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