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| Status |
Public on Jul 06, 2021 |
| Title |
mdr65_Dam_NR1 |
| Sample type |
SRA |
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| Source name |
larval brain
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| Organism |
Drosophila melanogaster |
| Characteristics |
genotype: R54C07-GAL4 x tub-GAL80ts, UAS-LT3-NDam
nutrient condition: NR
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| Extracted molecule |
genomic DNA |
| Extraction protocol |
Targeted DamID protocol from Marshall OJ, et al. Nat Protoc 2016.
Targeted DamID protocol from Marshall OJ, et al. Nat Protoc 2016.
DamID-seq
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| Library strategy |
OTHER |
| Library source |
genomic |
| Library selection |
other |
| Instrument model |
Illumina HiSeq 2000 |
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| Description |
mdr65_Pol.NR1.bedgraph
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| Data processing |
damidseq_pipeline. From Marshall and Brand. Bioinformatics 2015
Genome_build: dmel_r6
Supplementary_files_format_and_content: damidseq_pipeline. From Marshall and Brand. Bioinformatics 2015
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| Submission date |
Feb 10, 2020 |
| Last update date |
Jul 06, 2021 |
| Contact name |
Esteban Gonzalo Contreras Sepúlveda |
| E-mail(s) |
eocontre@uc.cl
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| Organization name |
Universidad de Chile
|
| Street address |
Independencia 1027
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| City |
Santiago |
| ZIP/Postal code |
8380453 |
| Country |
Chile |
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| Platform ID |
GPL13304 |
| Series (1) |
| GSE145055 |
Polymerase II binding analysis during nutrient restriction using targeted DamID |
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| Relations |
| BioSample |
SAMN14079806 |
| SRA |
SRX7704558 |
| Supplementary data files not provided |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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