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Sample GSM440103 Query DataSets for GSM440103
Status Public on Aug 31, 2009
Title IP ZT15, replica 2
Sample type RNA
 
Source name fly head
Organism Drosophila melanogaster
Characteristics time point: ZT15
replicate: 2
tissue: head
developmental stage: adult
Growth protocol Flies were grown under standard conditions in 12hs light and 12hs dark cycles
Extracted molecule total RNA
Extraction protocol Heads were collected and RNA extracted using TRIZOL
Label biotin
Label protocol RNA was utilized to prepare cDNA and cRNA using the Affymetrix IVT labeling Kit
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 18 hrs at 45C on GeneChip Drosophila Genome 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned with the Affymetrix GeneArray Scanner G7
Description IP sample, ZT15
Data processing The data were processed with GCRMA algorithm in the Bioconductor with default settings
 
Submission date Aug 13, 2009
Last update date Aug 28, 2018
Contact name Ken Sugino
Organization name Janelia Research Campus
Lab NeuroSeq
Street address 19700 Helix Dr
City Ashburn
State/province VA
ZIP/Postal code 20147
Country USA
 
Platform ID GPL1322
Series (2)
GSE17627 AGO 1 IMMUNOPRECIPITATION MICROARRAYS
GSE17629 Circadian analysis of miRNAs and their targets
Relations
Reanalyzed by GSE119084

Data table header descriptions
ID_REF
VALUE GCRMA summary value

Data table
ID_REF VALUE
1616608_a_at 10.3262
1622892_s_at 6.49411
1622893_at 12.9816
1622894_at 5.65738
1622895_at 5.34058
1622896_at 7.0352
1622897_at 3.8148
1622898_a_at 6.98158
1622899_at 3.0419
1622900_at 2.07996
1622901_at 2.83211
1622902_at 4.07754
1622903_s_at 6.66374
1622904_at 2.65532
1622905_at 2.65498
1622906_at 6.07329
1622907_at 7.62035
1622908_a_at 5.7283
1622909_at 7.68734
1622910_at 2.95818

Total number of rows: 18952

Table truncated, full table size 358 Kbytes.




Supplementary file Size Download File type/resource
GSM440103.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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