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Sample GSM471064 Query DataSets for GSM471064
Status Public on Nov 17, 2009
Title Healthy twin (86.Healthy)
Sample type genomic
 
Source name Healthy twin (86.Healthy)
Organism Homo sapiens
Characteristics gender: female
age: 6
ethnicity: White
cell type: white blood cell
Extracted molecule genomic DNA
Extraction protocol Total DNA was isolated from white blood cells by standard procedures
Label Cy3, Cy5
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description n/a
Data processing Standard Illumina processing protocol
 
Submission date Nov 16, 2009
Last update date Nov 16, 2009
Contact name Esteban Ballestar
Organization name Josep Carreras Research Institute (IJC)
Lab Epigenetics and Immune Disease
Street address Ctra de Can Ruti, Camí de les Escoles s/n
City Badalona, Barcelona
State/province N/A = Not Applicable
ZIP/Postal code 08916
Country Spain
 
Platform ID GPL9183
Series (1)
GSE19033 Changes in the Pattern of DNA Methylation Associate with Twin Discordance in SLE

Data table header descriptions
ID_REF
VALUE average beta value = Max(Cy5,0)/[Max(Cy3,0) + Max(Cy5,0) + 100]
Detection pval

Data table
ID_REF VALUE Detection pval
AATK_E63_R 0.95318 3.68E-38
AATK_P519_R 0.93857 3.68E-38
AATK_P709_R 0.9006 2.04E-13
ABCA1_E120_R 0.01773 1.45E-37
ABCA1_P45_F 0.02011 1.50E-28
ABCB4_E429_F 0.93349 3.68E-38
ABCB4_P51_F 0.91268 2.63E-33
ABCB4_P892_F 0.88592 3.17E-20
ABCC2_E16_R 0.94387 3.68E-38
ABCC2_P88_F 0.9549 3.68E-38
ABCC5_P444_F 0.01593 3.68E-38
ABCG2_P178_R 0.03295 3.68E-38
ABCG2_P310_R 0.01637 7.51E-24
ABL1_P53_F 0.03986 1.20E-23
ABL2_P459_R 0.02299 3.68E-38
ABO_E110_F 0.02256 3.68E-38
ABO_P312_F 0.07718 5.29E-05
ACTG2_E98_R 0.91434 2.38E-10
ACTG2_P346_F 0.90532 3.68E-38
ACTG2_P455_R 0.8997 2.87E-25

Total number of rows: 1505

Table truncated, full table size 43 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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