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Status |
Public on Nov 17, 2009 |
Title |
Control 1 (103.Control1) |
Sample type |
genomic |
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|
Source name |
Control 1 (103.Control1)
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Organism |
Homo sapiens |
Characteristics |
gender: female age: 9 ethnicity: White cell type: white blood cell
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Total DNA was isolated from white blood cells by standard procedures
|
Label |
Cy3, Cy5
|
Label protocol |
Standard Illumina labelling protocol
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Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol
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Description |
n/a
|
Data processing |
Standard Illumina processing protocol
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Submission date |
Nov 16, 2009 |
Last update date |
Nov 16, 2009 |
Contact name |
Esteban Ballestar |
Organization name |
Josep Carreras Research Institute (IJC)
|
Lab |
Epigenetics and Immune Disease
|
Street address |
Ctra de Can Ruti, Camà de les Escoles s/n
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City |
Badalona, Barcelona |
State/province |
N/A = Not Applicable |
ZIP/Postal code |
08916 |
Country |
Spain |
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Platform ID |
GPL9183 |
Series (1) |
GSE19033 |
Changes in the Pattern of DNA Methylation Associate with Twin Discordance in SLE |
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Data table header descriptions |
ID_REF |
|
VALUE |
average beta value = Max(Cy5,0)/[Max(Cy3,0) + Max(Cy5,0) + 100] |
Detection pval |
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Data table |
ID_REF |
VALUE |
Detection pval |
AATK_E63_R |
0.95265 |
3.68E-38 |
AATK_P519_R |
0.96207 |
3.68E-38 |
AATK_P709_R |
0.89413 |
3.68E-38 |
ABCA1_E120_R |
0.02608 |
3.68E-38 |
ABCA1_P45_F |
0.03851 |
3.68E-38 |
ABCB4_E429_F |
0.93344 |
3.68E-38 |
ABCB4_P51_F |
0.93638 |
3.68E-38 |
ABCB4_P892_F |
0.80899 |
3.68E-38 |
ABCC2_E16_R |
0.96033 |
3.68E-38 |
ABCC2_P88_F |
0.94822 |
3.68E-38 |
ABCC5_P444_F |
0.02502 |
3.68E-38 |
ABCG2_P178_R |
0.09027 |
3.68E-38 |
ABCG2_P310_R |
0.0355 |
3.68E-38 |
ABL1_P53_F |
0.04871 |
3.68E-38 |
ABL2_P459_R |
0.06077 |
3.68E-38 |
ABO_E110_F |
0.04778 |
3.68E-38 |
ABO_P312_F |
0.09551 |
4.56E-31 |
ACTG2_E98_R |
0.88904 |
3.68E-38 |
ACTG2_P346_F |
0.92327 |
3.68E-38 |
ACTG2_P455_R |
0.95369 |
3.68E-38 |
Total number of rows: 1505
Table truncated, full table size 43 Kbytes.
Supplementary data files not provided |
Processed data included within Sample table |
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