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Sample GSM4831387 Query DataSets for GSM4831387
Status Public on May 14, 2022
Title LOUCY cell line with MEF2C construct, no overexpression. Replicate 2 [M-2]
Sample type RNA
 
Source name LOUCY cell line with MEF2C construct, no overexpression
Organism Homo sapiens
Characteristics cell line: LOUCY
genotype/variation: MEF2C construct, no overexpression
treatment: without doxycyline
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to manufacturer's instructions
Label biotin
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Data processing Data analysis was performed in R version 3.6.3. The Affy package, version 1.64.0, was used for Robust Multichip Average (RMA) normalization.
 
Submission date Oct 18, 2020
Last update date May 14, 2022
Contact name Rico Hagelaar
E-mail(s) R.Hagelaar@prinsesmaximacentrum.nl
Organization name Princess Maxima Center
Street address Heidelberglaan 25
City Utrecht
ZIP/Postal code 3584CS
Country Netherlands
 
Platform ID GPL570
Series (2)
GSE159506 The MEF2C oncogene opposes Notch signalling in T versus B lineage decision and drives leukemia in the thymus context [array]
GSE160409 The MEF2C oncogene opposes Notch signalling in T versus B lineage decision and drives leukemia in the thymus context

Data table header descriptions
ID_REF
VALUE Log2 RMA signal

Data table
ID_REF VALUE
1007_s_at 4.91465517322252
1053_at 8.37572098414822
117_at 4.73257657950178
121_at 6.7118513240088
1255_g_at 2.33232262280478
1294_at 8.13338549501033
1316_at 5.10040674789229
1320_at 3.04236246688007
1405_i_at 2.27938341342771
1431_at 7.38228626282584
1438_at 4.86738938684345
1487_at 7.5692664381685
1494_f_at 4.48954486252616
1552256_a_at 8.23568305082875
1552257_a_at 8.67264557578835
1552258_at 5.02242025476659
1552261_at 4.1364182256049
1552263_at 7.73134065241563
1552264_a_at 8.44305962094098
1552266_at 2.14234197458994

Total number of rows: 54675

Table truncated, full table size 1479 Kbytes.




Supplementary file Size Download File type/resource
GSM4831387_Array2.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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