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Sample GSM4831390 Query DataSets for GSM4831390
Status Public on May 14, 2022
Title LOUCY cell line with MEF2C construct, MEF2C overexpression. Replicate 2 [M+2]
Sample type RNA
 
Source name LOUCY cell line with MEF2C construct, MEF2C overexpression
Organism Homo sapiens
Characteristics cell line: LOUCY
genotype/variation: MEF2C construct, MEF2C overexpression
treatment: with doxycyline
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to manufacturer's instructions
Label biotin
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Data processing Data analysis was performed in R version 3.6.3. The Affy package, version 1.64.0, was used for Robust Multichip Average (RMA) normalization.
 
Submission date Oct 18, 2020
Last update date May 14, 2022
Contact name Rico Hagelaar
E-mail(s) R.Hagelaar@prinsesmaximacentrum.nl
Organization name Princess Maxima Center
Street address Heidelberglaan 25
City Utrecht
ZIP/Postal code 3584CS
Country Netherlands
 
Platform ID GPL570
Series (2)
GSE159506 The MEF2C oncogene opposes Notch signalling in T versus B lineage decision and drives leukemia in the thymus context [array]
GSE160409 The MEF2C oncogene opposes Notch signalling in T versus B lineage decision and drives leukemia in the thymus context

Data table header descriptions
ID_REF
VALUE Log2 RMA signal

Data table
ID_REF VALUE
1007_s_at 4.92917923771344
1053_at 8.37686849286968
117_at 4.54594580776977
121_at 6.89163513768419
1255_g_at 2.36941733403545
1294_at 8.0082441482988
1316_at 5.24427921158527
1320_at 3.16818895549285
1405_i_at 2.23891283717225
1431_at 7.68994242429911
1438_at 4.68817219755829
1487_at 7.73530234128424
1494_f_at 4.69401241671595
1552256_a_at 8.42911808080394
1552257_a_at 8.69760745573974
1552258_at 4.98223130486282
1552261_at 3.99129042456162
1552263_at 7.52099561362683
1552264_a_at 8.28785917342997
1552266_at 1.99518863737841

Total number of rows: 54675

Table truncated, full table size 1479 Kbytes.




Supplementary file Size Download File type/resource
GSM4831390_Array5.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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