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Sample GSM4831404 Query DataSets for GSM4831404
Status Public on May 14, 2022
Title LOUCY cell line with MEF2C and ICN construct, no overexpression. Replicate 1 [M_ICN-1]
Sample type RNA
 
Source name LOUCY cell line with MEF2C and ICN construct, no overexpression
Organism Homo sapiens
Characteristics cell line: LOUCY
genotype/variation: MEF2C and ICN construct, no overexpression
treatment: without doxycyline
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to manufacturer's instructions
Label biotin
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Data processing Data analysis was performed in R version 3.6.3. The Affy package, version 1.64.0, was used for Robust Multichip Average (RMA) normalization.
 
Submission date Oct 18, 2020
Last update date May 14, 2022
Contact name Rico Hagelaar
E-mail(s) R.Hagelaar@prinsesmaximacentrum.nl
Organization name Princess Maxima Center
Street address Heidelberglaan 25
City Utrecht
ZIP/Postal code 3584CS
Country Netherlands
 
Platform ID GPL570
Series (2)
GSE159506 The MEF2C oncogene opposes Notch signalling in T versus B lineage decision and drives leukemia in the thymus context [array]
GSE160409 The MEF2C oncogene opposes Notch signalling in T versus B lineage decision and drives leukemia in the thymus context

Data table header descriptions
ID_REF
VALUE Log2 RMA signal

Data table
ID_REF VALUE
1007_s_at 4.89401139548867
1053_at 8.61274668982376
117_at 4.27327484476249
121_at 6.82676251338826
1255_g_at 2.49224386661561
1294_at 8.08508842386992
1316_at 5.20844726350069
1320_at 2.86435550986007
1405_i_at 2.02802993654562
1431_at 5.78279135438289
1438_at 4.58319258893725
1487_at 7.57749074052372
1494_f_at 4.41521213232168
1552256_a_at 7.60974788847767
1552257_a_at 8.46736464210143
1552258_at 4.89327680525763
1552261_at 3.84928112721333
1552263_at 7.36740347662836
1552264_a_at 8.24228981739281
1552266_at 2.07832988935994

Total number of rows: 54675

Table truncated, full table size 1478 Kbytes.




Supplementary file Size Download File type/resource
GSM4831404_Array19.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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