|
| Status |
Public on Jul 31, 2010 |
| Title |
Aft (Anthocyanin fruit) mutant, biological rep2 |
| Sample type |
RNA |
| |
|
| Source name |
Mature green tomato fruit
|
| Organism |
Solanum lycopersicum |
| Characteristics |
phenotype: Limited amount of anthocyanins (spots)
tissue: Fruit peel
genotype: Anthocyanin fruit (Aft) mutant (accession number LA1996)
age: Green fruit
|
| Treatment protocol |
No treatment
|
| Growth protocol |
Selected tomato genotypes were grown during the winter season in a controlled heated greenhouse (minimal temperature 12°C). Fruits were collected at mature green, turning red and red stages of development.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
The total RNA was extracted using the SpectrumTM Plant Total RNA Kit (SIGMA)
|
| Label |
biotin
|
| Label protocol |
Affymetrix standard labeling protocol
|
| |
|
| Hybridization protocol |
Affymetrix standard hybridization protocol
|
| Scan protocol |
Affymetrix standard scan protocol
|
| Description |
No additional description required
|
| Data processing |
GC-RMA Algorithm
|
| |
|
| Submission date |
Jan 07, 2010 |
| Last update date |
Jan 07, 2010 |
| Contact name |
Pierdomenico Perata |
| E-mail(s) |
p.perata@sssup.it
|
| Phone |
+39050881901
|
| Organization name |
Sant'Anna School of Advanced Studies
|
| Department |
Institute of Life Sciences
|
| Lab |
PlantLab
|
| Street address |
Via Guidiccioni 8-10
|
| City |
San Giuliano Terme |
| State/province |
Pisa |
| ZIP/Postal code |
56010 |
| Country |
Italy |
| |
|
| Platform ID |
GPL4741 |
| Series (1) |
| GSE19792 |
Transcript profiling of tomato mutants producing anthocyanins in the fruit |
|
