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Sample GSM506135 Query DataSets for GSM506135
Status Public on Dec 15, 2011
Title transgenic PLN (T1)
Sample type RNA
 
Source name transgenic PLN
Organism Mus musculus
Characteristics strain: FVB/N
age: 11 weeks
tissue: whole heart
Treatment protocol wilde type and transgenic mice
Growth protocol male FVB/N mice at 11 weeks of age
Extracted molecule total RNA
Extraction protocol Trizol extraction from frozen tissue
Label biotin
Label protocol biotin-labeled cRNA synthesis, using the CodeLink Expression Assay Reagent Kit (GE Healthcare, USA).
 
Hybridization protocol as per GE Healthcare protocols
Scan protocol as per GE Healthcare protocols
Description T00315718_2006-7-10_T1{1}.TXT
Data processing Good and Low flagged normalized signals from CodeLink expression analysis were imported to genesifter for further analysis.
 
Submission date Feb 03, 2010
Last update date Dec 15, 2011
Contact name Despina Sanoudou
E-mail(s) dsanoudo@enders.tch.harvard.edu
Phone +30-210-6597453
Fax +30-210-6597545
Organization name Foundation for Biomedical Research, Academy of Athens
Department Molecular Biology
Lab Sanoudou Lab
Street address Soranou Efesiou 4
City Athens
ZIP/Postal code 115 27
Country Greece
 
Platform ID GPL2897
Series (1)
GSE20172 Transgenic mice carrying the human PLN gene

Data table header descriptions
ID_REF
VALUE Normalized intensity (CodeLink expression analysis, 'Good' and 'Low' flagged data)
Quality_flag

Data table
ID_REF VALUE Quality_flag
1002 8.1145 G
1003 1.1635 G
1004 1.1899 G
1005 0.8914 G
1006 1.1101 G
1010 1.9176 G
1012 4.1117 G
1013 1.2681 G
1017 1.2627 G
1018 1.2455 G
1019 1.3146 G
1020 1.2175 G
1024 1.0236 G
1026 2.8652 G
1027 I
1030 1.8605 G
1031 1.988 G
1034 2.27 G
1039 1.6528 G
1040 1.3482 G

Total number of rows: 36227

Table truncated, full table size 556 Kbytes.




Supplementary file Size Download File type/resource
GSM506135.TXT.gz 5.0 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

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