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Sample GSM529593 Query DataSets for GSM529593
Status Public on Mar 29, 2011
Title CBFb-SMMHC animal 2, replicate 3
Sample type RNA
 
Source name Leukemic mice 2 months after ENU treatment
Organism Mus musculus
Characteristics cell type: leukemic spleen cells
genotype: CBFb-SMMHC chimera
Treatment protocol Cells were isolated from the spleens of leukemic mice
Extracted molecule total RNA
Extraction protocol RNA-STAT extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description n/a
Data processing RMA
 
Submission date Mar 31, 2010
Last update date Mar 29, 2011
Contact name Christopher Pan
E-mail(s) cpan@mail.nih.gov
Organization name NIH
Department NHGRI
Street address Rm 5228, Bldg 50, South Dr.
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL1261
Series (1)
GSE21155 Accelerated leukemogenesis by truncated CBFb-SMMHC defective in high-affinity binding with RUNX1

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
AFFX-BioB-5_at 7.14253
AFFX-BioB-M_at 7.7808
AFFX-BioB-3_at 7.43875
AFFX-BioC-5_at 9.0694
AFFX-BioC-3_at 9.38867
AFFX-BioDn-5_at 10.0494
AFFX-BioDn-3_at 11.2813
AFFX-CreX-5_at 12.646
AFFX-CreX-3_at 13.1295
AFFX-DapX-5_at 8.16336
AFFX-DapX-M_at 9.21721
AFFX-DapX-3_at 9.78532
AFFX-LysX-5_at 5.44893
AFFX-LysX-M_at 6.31367
AFFX-LysX-3_at 7.36232
AFFX-PheX-5_at 6.05029
AFFX-PheX-M_at 6.58484
AFFX-PheX-3_at 6.95404
AFFX-ThrX-5_at 5.98725
AFFX-ThrX-M_at 6.93177

Total number of rows: 45101

Table truncated, full table size 849 Kbytes.




Supplementary file Size Download File type/resource
GSM529593_Y.K_KI-FL-03-012307.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM529593_Y.K_KL2-02-012307.rma.chp.gz 309.0 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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