NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM5420055 Query DataSets for GSM5420055
Status Public on Mar 02, 2022
Title 189_VD_17
Sample type RNA
 
Source name Whole blood
Organism Bos taurus
Characteristics treatment group: Treated_1
study: 2017VD
location: MS
animal info: Steer
vaccinated: N/A
dewormed: N/A
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from Tempus Blood Tubes with Tempus Spin RNA Isolation Kit
Label Biotin
Label protocol NanoString nCounter mRNA Bovine Custom Panel
 
Hybridization protocol NanoString nCounter PrepStation
Scan protocol NanoString SPRINT Profiler set to high resolution (550)
Description mRNA count data
AWO22587-0140-189-VD-17
Data processing NanoString nSolver Analysis Software v4.0 was utilized for quality assessment and raw gene count accession. Four housekeeping, six positive spike-in, and eight negative control genes were used for intersample count normalization.
 
Submission date Jul 06, 2021
Last update date Mar 02, 2022
Contact name Matthew Adam Scott
E-mail(s) matthewscott@tamu.edu
Organization name Texas A&M University
Department Large Animal Clinical Sciences
Street address 3201 Russell Long Blvd
City Canyon
State/province TX
ZIP/Postal code 79015
Country USA
 
Platform ID GPL30354
Series (1)
GSE179536 Nanostring nCounter Bovine Arrival BRD 60 Panel v1.0

Data table header descriptions
ID_REF
VALUE nSolver normalized gene counts

Data table
ID_REF VALUE
1 36.9
2 142.48
3 710.26
4 950.56
5 36.9
6 36.9
7 36.9
8 36.9
9 36.9
10 36.9
11 2315.8
12 133.97
13 36.9
14 36.9
15 36.9
16 36.9
17 36.9
18 36.9
19 36.9
20 36.9

Total number of rows: 74

Table truncated, full table size <1 Kbytes.




Supplementary file Size Download File type/resource
GSM5420055_20210415_209411790722_AWO22587-0140-189-VD-17_08.RCC.gz 1.3 Kb (ftp)(http) RCC
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap