|
Status |
Public on Dec 10, 2021 |
Title |
Sample90.Mouse.204549720013_R06C01 |
Sample type |
genomic |
|
|
Source name |
Kidney
|
Organism |
Mus musculus |
Characteristics |
age: 0.25 Sex: Female samplename: Y4F-4 genotype: 4F condition: Control group: 7.4F-young durationtreatment: NA mouse strain: c57/B6
|
Treatment protocol |
Standard Illumina Protocol
|
Growth protocol |
DNA extracted from tissues
|
Extracted molecule |
genomic DNA |
Extraction protocol |
genomic DNA was extracted
|
Label |
Cy3 and Cy5
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to the the Beadchip HorvathMammalMethylChip40 using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
genomic DNA methylation from tissue=Kidney species=Mouse
|
Data processing |
SeSaMe normalization as described in W. Zhou et al 2018. PMID: 30085201
|
|
|
Submission date |
Dec 10, 2021 |
Last update date |
Dec 10, 2021 |
Contact name |
Steve Horvath |
E-mail(s) |
shorvath@altoslabs.com
|
Organization name |
University of California, Los Angeles
|
Department |
Human Genetics
|
Lab |
Horvath
|
Street address |
695 Charles E. Young Drive South, Box 708822
|
City |
Los Angeles |
State/province |
CA |
ZIP/Postal code |
90095-7088 |
Country |
USA |
|
|
Platform ID |
GPL28271 |
Series (1) |
GSE190665 |
In vivo partial reprogramming in 4F mice |
|