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| Status |
Public on Nov 09, 2022 |
| Title |
ACG5DVUT47 |
| Sample type |
genomic |
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| Source name |
Blood
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| Organism |
Homo sapiens |
| Characteristics |
Sex: Male
population: Kazak
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| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted from blood with a salt extraction method (Lahiri et al. 1991) with modification, or a commercial DNA extraction kit (e.g., Qiagen).
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| Label |
Cy3
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| Label protocol |
performed by the Gene By Gene, Ltd., Houston, TX, USA.
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| Hybridization protocol |
performed by the Gene By Gene, Ltd., Houston, TX, USA.
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| Scan protocol |
https://jp.illumina.com/content/dam/illumina-marketing/documents/products/technotes/technote_iselect_design.pdf
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| Description |
Jetisuu_Kazak_mtDNA_AL015
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| Data processing |
Data processing was performed by the Gene By Gene, Ltd., Houston, TX, USA.
*neo.mt.txt files contain rsID, chromosome, position and genotype
The matrix table includes genotype of the positions that are different from rCRS along the mitochondrial DNA and the haplogroup affiliation of mtDNA.
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| Submission date |
Jul 18, 2022 |
| Last update date |
Nov 10, 2022 |
| Contact name |
Ayken Askapuli |
| E-mail(s) |
aykenau@gmail.com
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| Organization name |
University of Wisconsin-Madison
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| Department |
Integrative Biology
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| Street address |
250 North Mills Street
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| City |
Madison |
| State/province |
WI |
| ZIP/Postal code |
53706 |
| Country |
USA |
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| Platform ID |
GPL32489 |
| Series (1) |
| GSE208402 |
Kazak mitochondrial genomes provide insights into the human population history of Central Eurasia |
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| Supplementary file |
Size |
Download |
File type/resource |
| GSM6345692_AL015.neo.mt.txt.gz |
26.4 Kb |
(ftp)(http) |
TXT |
| Processed data provided as supplementary file |
| Processed data are available on Series record |
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