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Sample GSM663129 Query DataSets for GSM663129
Status Public on Aug 04, 2011
Title Human CD4+ naïve T cells (1)
Sample type RNA
 
Source name peripheral blood
Organism Homo sapiens
Characteristics cell type: CD4+CD45RA+CCR7+CXCR5-
Treatment protocol Unstimulated sample
Growth protocol Unstimulated sample
Extracted molecule total RNA
Extraction protocol Trizol was used to extract the total RNA from each sample
Label biotin
Label protocol Affymetrix Hu133Plus2 labelling protocol was strictly followed
 
Hybridization protocol Affymetrix Hu133Plus2 hybridisation protocol was strictly followed
Scan protocol Affymetrix Hu133Plus2 scanning protocol was strictly followed
Description GPL570
Data processing Data presented are ExpressionStat 5.0 data with no modifications as caculated by GCOS software
 
Submission date Jan 28, 2011
Last update date Sep 01, 2016
Contact name Santi Suryani
E-mail(s) s.suryani@garvan.org.au
Organization name Garvan Institute of Medical Research
Department Immunology and Inflammation
Street address 384 Victoria Street, Darlinghurst
City Sydney
State/province NSW
ZIP/Postal code 2010
Country Australia
 
Platform ID GPL570
Series (1)
GSE26928 Human peripheral blood CD4+ T cell subsets
Relations
Reanalyzed by GSE86362

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 296.253 P 0.000509415
AFFX-BioB-M_at 343.464 P 4.42873e-05
AFFX-BioB-3_at 212.534 P 4.42873e-05
AFFX-BioC-5_at 638.078 P 5.16732e-05
AFFX-BioC-3_at 838.875 P 4.42873e-05
AFFX-BioDn-5_at 1779.5 P 4.42873e-05
AFFX-BioDn-3_at 2225.75 P 4.42873e-05
AFFX-CreX-5_at 8457.26 P 5.16732e-05
AFFX-CreX-3_at 9278.39 P 4.42873e-05
AFFX-DapX-5_at 72.5328 P 0.000340305
AFFX-DapX-M_at 827.095 P 8.14279e-05
AFFX-DapX-3_at 1925.7 P 4.42873e-05
AFFX-LysX-5_at 17.4872 P 0.0138105
AFFX-LysX-M_at 131.633 P 6.02111e-05
AFFX-LysX-3_at 392.954 P 5.16732e-05
AFFX-PheX-5_at 24.3982 P 0.0396608
AFFX-PheX-M_at 84.8575 P 6.02111e-05
AFFX-PheX-3_at 206.457 P 8.14279e-05
AFFX-ThrX-5_at 11.5896 A 0.139482
AFFX-ThrX-M_at 122.616 P 4.42873e-05

Total number of rows: 54675

Table truncated, full table size 1634 Kbytes.




Supplementary file Size Download File type/resource
GSM663129.CEL.gz 4.9 Mb (ftp)(http) CEL
GSM663129.CHP.gz 301.3 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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