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Sample GSM6796989 Query DataSets for GSM6796989
Status Public on Dec 07, 2022
Title Serum-ISO-24hrs-rep3
Sample type protein
 
Source name serum, ISO, 24hrs
Organism Mus musculus
Characteristics age: 22 weeks
gender: male
strain: C57BL/6J
tissue: serum
Treatment protocol Mice were subcutaneous injected with a single dose of isoproterenol (ISO, 5 mg/kg body weight) or vehicle saline (10 ml/kg body weight). Hearts and vessels were harvested and immediately frozen in liquid nitrogen.
Extracted molecule protein
Extraction protocol Weigh out tissue and cut into cubes. Prepare protein extraction reagent containing inhibitors. Add ice-cold Protein Extraction Reagent containing protease inhibitors. Grind in a blender on low power using 30-second bursts until fully homogenized. Allow material to cool for 1 minute between bursts. Centrifuge the lysate at 14,000xg for 15 minutes and transfer the supernatant to a new tube for further analysis.
Label PE-Streptavidin
Label protocol Samples were labeled according to the manufacturer’s instructions
 
Hybridization protocol Cytokine arrays were used according to the manufacturer’s instructions. All sample measurements were performed in duplicate. The array plate were washed, incubated with a biotin-conjugated beads for half an hour, washed again, and developed for half an hour with PE-conjugated streptavidin.
Scan protocol Driven by the flowing sheath fluid, the microspheres pass through the red and green laser successively in a single row. The red laser is used to determine the fluorescence code of the microspheres, and the green laser is used to measure the fluorescence intensity of the molecules reported by the Luminex X-200.
Description SI24-3
Data processing By comparing the signal intensities, relative expression levels of cytokines can be made. The intensities of signals can be quantified by densitometry.
 
Submission date Dec 06, 2022
Last update date Dec 07, 2022
Contact name Xianda Chen
E-mail(s) chenxd@bjmu.edu.cn
Organization name Peking University Third Hospital
Department Institute of Vascular Medicine
Street address No. 49, Huayuan Bei Road, Haidian District
City Beijing
ZIP/Postal code 100191
Country China
 
Platform ID GPL32918
Series (1)
GSE220225 Cytokines in the ApoE-/- mice atherosclerotic plaque

Data table header descriptions
ID_REF
VALUE Luminex X-200 computed normalized signal indensity.

Data table
ID_REF VALUE
CCL20 0.612483585
IL-1B 0.9485607
CXCL5 0.53724725
TNF 2.481981098
CSF2 1.951083936
CX3CL 1.27585699
CCL1 1.770528785
CXCL13 2.902777778
IL-16 2.189928973
IFNG 2.437023811
CXCL10 1.666473183
IL-2 1.798021434
CXCL11 1.293424532
IL-6 2.250276595
IL-4 0.972335898
CCL7 0.950044631
CCL12 1.709082853
CCL2 1.153261335
CCL22 0.91711807
CCL5 1.049704438

Total number of rows: 31

Table truncated, full table size <1 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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