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Sample GSM685027 Query DataSets for GSM685027
Status Public on Mar 03, 2011
Title A279
Sample type genomic
 
Channel 1
Source name Genomic DNA from PS5/CS heterozygous male genotype.
Organism Drosophila melanogaster
Characteristics genotype/variation: PS5/CS
gender: male (XY)
developmental stage: adult
Extracted molecule genomic DNA
Extraction protocol QIAGEN DNeasy blood and tissue kit
Label Cy5
Label protocol Genisphere 3DNA system
 
Channel 2
Source name Genomic DNA from PS1 male genotype.
Organism Drosophila melanogaster
Characteristics genotype/variation: PS1
gender: male (XY)
developmental stage: adult
Extracted molecule genomic DNA
Extraction protocol QIAGEN DNeasy blood and tissue kit
Label Cy3
Label protocol Genisphere 3DNA system
 
 
Hybridization protocol Genisphere 3DNA system
Scan protocol Scanned on an Axon 4000B scanner.
Images were quantified using Genepix.
Description Biological replicate
Data processing Sequential spatial and intensity normalization.
 
Submission date Mar 03, 2011
Last update date Mar 03, 2011
Contact name Jun Zhou
E-mail(s) jzhou@oeb.harvard.edu
Phone 617-496-5540
Fax 617-496-5854
Organization name Harvard University
Department Organismic and Evolutionary Biology
Street address 16 Divinity Ave. Rm2112
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6056
Series (1)
GSE27632 Copy number variation: the balance between gene dosage and expression in Drosophila melanogaster

Data table header descriptions
ID_REF
VALUE log2(REDsignal/GREENsignal) normalized ratios

Data table
ID_REF VALUE
HLeg00001 -0.219161476
HLeg00002 0.000744619
HLeg00003
HLeg00004 -0.177055478
HLeg00005 0.010263376
HLeg00006 -0.40877987
HLeg00007
HLeg00008 0.064230825
HLeg00009 -0.3365439
HLeg00010 -0.224157721
HLeg00011
HLeg00012
HLeg00013
HLeg00014 -0.154942808
HLeg00015
HLeg00016
HLeg00017
HLeg00018
HLeg00019
HLeg00020

Total number of rows: 21413

Table truncated, full table size 362 Kbytes.




Supplementary file Size Download File type/resource
GSM685027.gpr.gz 2.1 Mb (ftp)(http) GPR
Processed data included within Sample table

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