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Sample GSM701736 Query DataSets for GSM701736
Status Public on Apr 05, 2011
Title [E-MTAB-369] Xenopus developmental stage 02 1
Sample type RNA
 
Source name whole embryo, developmental stage 02
Organism Xenopus laevis
Characteristics developmental stage: 2
genotype: wild type
organism part: whole embryo
Sex: mixed sex
Extracted molecule total RNA
Extraction protocol Total RNA extraction by RNeasy Lipid Tissue Mini Kit.
Label biotin
Label protocol One-cycle Target Labeling.
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Data processing MAS5, default settings
 
Submission date Apr 05, 2011
Last update date Apr 05, 2011
Contact name Naoki Irie
Organization name RIKEN Center for Developmental Biology
Lab Laboratory for Evolutionary Morphology
Street address 2-2-3 Minatojima-minami Chuo-ku
City Kobe
State/province Hyogo
ZIP/Postal code 650-0047
Country Japan
 
Platform ID GPL10756
Series (2)
GSE28390 [E-MTAB-369] Transcription profiling by array of Xenopus laevis embryos at 15 different stages
GSE28391 Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis

Data table header descriptions
ID_REF
VALUE MAS5
ABS_CALL

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-3_at 466.8353466 P
AFFX-BioB-5_at 404.5543142 P
AFFX-BioB-M_at 679.2977441 P
AFFX-BioC-3_at 1590.327921 P
AFFX-BioC-5_at 1212.847592 P
AFFX-BioDn-3_at 4036.815105 P
AFFX-BioDn-5_at 2939.904955 P
AFFX-CreX-3_at 14561.90454 P
AFFX-CreX-5_at 14984.50347 P
AFFX-DapX-3_at 3727.841099 P
AFFX-DapX-5_at 677.9582728 P
AFFX-DapX-M_at 2296.738047 P
AFFX-LysX-3_at 872.0218539 P
AFFX-LysX-5_at 258.3190703 P
AFFX-LysX-M_at 356.4206654 P
AFFX-PheX-3_at 474.1499091 P
AFFX-PheX-5_at 306.7001358 P
AFFX-PheX-M_at 380.9078176 P
AFFX-r2-Bs-dap-3_at 5857.995973 P
AFFX-r2-Bs-dap-5_at 710.6627411 P

Total number of rows: 32635

Table truncated, full table size 1016 Kbytes.




Supplementary file Size Download File type/resource
GSM701736_Xl_Stage02_1.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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