NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE28390 Query DataSets for GSE28390
Status Public on Apr 05, 2011
Title [E-MTAB-369] Transcription profiling by array of Xenopus laevis embryos at 15 different stages
Organism Xenopus laevis
Experiment type Expression profiling by array
Summary Transcription profiling of X.laevis development.
The experiment were perfomed as a part of our Vertebrate Evo-Devo project. The aim of the project is to compare transcription profiles of normal (unmanipulated, wild-type, whole embryo) vertebrate embryos.
 
Overall design Total RNA was collected from wild type X.laevis whole embryos at 15 different stages (Stages:2, 5, 9, 11, 13, 17, 19, 21, 23, 26, 28, 31, 37/38, 43, 48), and hybridized to Affymetrix Xenopus laevis Genome 2.0 Array. All the stages contains data from 2 biological replications. Each staged-samples consists of pooled total RNA from several whole embryos.
 
Contributor(s) Irie N
Citation(s) 21427719
Submission date Apr 05, 2011
Last update date Oct 02, 2015
Contact name Naoki Irie
Organization name RIKEN Center for Developmental Biology
Lab Laboratory for Evolutionary Morphology
Street address 2-2-3 Minatojima-minami Chuo-ku
City Kobe
State/province Hyogo
ZIP/Postal code 650-0047
Country Japan
 
Platforms (1)
GPL10756 [X_laevis_2] Affymetrix Xenopus laevis Genome 2.0 Array
Samples (30)
GSM701736 [E-MTAB-369] Xenopus developmental stage 02 1
GSM701737 [E-MTAB-369] Xenopus developmental stage 02 2
GSM701738 [E-MTAB-369] Xenopus developmental stage 05 1
This SubSeries is part of SuperSeries:
GSE28391 Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis
Relations
BioProject PRJNA143269

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28390_RAW.tar 103.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap