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Sample GSM701743 Query DataSets for GSM701743
Status Public on Apr 05, 2011
Title [E-MTAB-369] Xenopus developmental stage 11 2
Sample type RNA
 
Source name whole embryo, developmental stage 11
Organism Xenopus laevis
Characteristics developmental stage: 11
genotype: wild type
organism part: whole embryo
Sex: mixed sex
Extracted molecule total RNA
Extraction protocol Total RNA extraction by RNeasy Lipid Tissue Mini Kit.
Label biotin
Label protocol One-cycle Target Labeling.
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Data processing MAS5, default settings
 
Submission date Apr 05, 2011
Last update date Apr 05, 2011
Contact name Naoki Irie
Organization name RIKEN Center for Developmental Biology
Lab Laboratory for Evolutionary Morphology
Street address 2-2-3 Minatojima-minami Chuo-ku
City Kobe
State/province Hyogo
ZIP/Postal code 650-0047
Country Japan
 
Platform ID GPL10756
Series (2)
GSE28390 [E-MTAB-369] Transcription profiling by array of Xenopus laevis embryos at 15 different stages
GSE28391 Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis

Data table header descriptions
ID_REF
VALUE MAS5
ABS_CALL

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-3_at 763.1733899 P
AFFX-BioB-5_at 597.7443159 P
AFFX-BioB-M_at 1092.464361 P
AFFX-BioC-3_at 2320.437164 P
AFFX-BioC-5_at 1845.937372 P
AFFX-BioDn-3_at 5609.34675 P
AFFX-BioDn-5_at 4299.883542 P
AFFX-CreX-3_at 19512.0854 P
AFFX-CreX-5_at 18856.03126 P
AFFX-DapX-3_at 4523.644196 P
AFFX-DapX-5_at 621.8019562 P
AFFX-DapX-M_at 2376.140527 P
AFFX-LysX-3_at 1056.893018 P
AFFX-LysX-5_at 307.4950324 P
AFFX-LysX-M_at 379.5603034 P
AFFX-PheX-3_at 550.1138733 P
AFFX-PheX-5_at 321.6106278 P
AFFX-PheX-M_at 510.4033634 P
AFFX-r2-Bs-dap-3_at 6688.057545 P
AFFX-r2-Bs-dap-5_at 642.6978162 P

Total number of rows: 32635

Table truncated, full table size 1016 Kbytes.




Supplementary file Size Download File type/resource
GSM701743_Xl_Stage11_2.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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