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Sample GSM701748 Query DataSets for GSM701748
Status Public on Apr 05, 2011
Title [E-MTAB-369] Xenopus developmental stage 19 1
Sample type RNA
 
Source name whole embryo, developmental stage 19
Organism Xenopus laevis
Characteristics developmental stage: 19
genotype: wild type
organism part: whole embryo
Sex: mixed sex
Extracted molecule total RNA
Extraction protocol Total RNA extraction by RNeasy Lipid Tissue Mini Kit.
Label biotin
Label protocol One-cycle Target Labeling.
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Data processing MAS5, default settings
 
Submission date Apr 05, 2011
Last update date Apr 05, 2011
Contact name Naoki Irie
Organization name RIKEN Center for Developmental Biology
Lab Laboratory for Evolutionary Morphology
Street address 2-2-3 Minatojima-minami Chuo-ku
City Kobe
State/province Hyogo
ZIP/Postal code 650-0047
Country Japan
 
Platform ID GPL10756
Series (2)
GSE28390 [E-MTAB-369] Transcription profiling by array of Xenopus laevis embryos at 15 different stages
GSE28391 Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis

Data table header descriptions
ID_REF
VALUE MAS5
ABS_CALL

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-3_at 432.0698827 P
AFFX-BioB-5_at 425.9880743 P
AFFX-BioB-M_at 711.8373248 P
AFFX-BioC-3_at 1595.333073 P
AFFX-BioC-5_at 1159.539193 P
AFFX-BioDn-3_at 4092.816069 P
AFFX-BioDn-5_at 2853.479787 P
AFFX-CreX-3_at 15179.23317 P
AFFX-CreX-5_at 13770.24477 P
AFFX-DapX-3_at 2890.204996 P
AFFX-DapX-5_at 368.2353083 P
AFFX-DapX-M_at 1498.784739 P
AFFX-LysX-3_at 488.1782416 P
AFFX-LysX-5_at 216.3659425 P
AFFX-LysX-M_at 246.9453612 P
AFFX-PheX-3_at 317.8304198 P
AFFX-PheX-5_at 200.0767943 P
AFFX-PheX-M_at 320.5173683 P
AFFX-r2-Bs-dap-3_at 4360.535324 P
AFFX-r2-Bs-dap-5_at 400.845011 P

Total number of rows: 32635

Table truncated, full table size 1016 Kbytes.




Supplementary file Size Download File type/resource
GSM701748_Xl_Stage19_1.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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