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Sample GSM701758 Query DataSets for GSM701758
Status Public on Apr 05, 2011
Title [E-MTAB-369] Xenopus developmental stage 31 1
Sample type RNA
 
Source name whole embryo, developmental stage 31
Organism Xenopus laevis
Characteristics developmental stage: 31
genotype: wild type
organism part: whole embryo
Sex: mixed sex
Extracted molecule total RNA
Extraction protocol Total RNA extraction by RNeasy Lipid Tissue Mini Kit.
Label biotin
Label protocol One-cycle Target Labeling.
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Data processing MAS5, default settings
 
Submission date Apr 05, 2011
Last update date Apr 05, 2011
Contact name Naoki Irie
Organization name RIKEN Center for Developmental Biology
Lab Laboratory for Evolutionary Morphology
Street address 2-2-3 Minatojima-minami Chuo-ku
City Kobe
State/province Hyogo
ZIP/Postal code 650-0047
Country Japan
 
Platform ID GPL10756
Series (2)
GSE28390 [E-MTAB-369] Transcription profiling by array of Xenopus laevis embryos at 15 different stages
GSE28391 Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis

Data table header descriptions
ID_REF
VALUE MAS5
ABS_CALL

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-3_at 450.1627615 P
AFFX-BioB-5_at 390.6219661 P
AFFX-BioB-M_at 589.7663071 P
AFFX-BioC-3_at 1441.803043 P
AFFX-BioC-5_at 1071.934028 P
AFFX-BioDn-3_at 3412.302418 P
AFFX-BioDn-5_at 2736.935175 P
AFFX-CreX-3_at 14201.99913 P
AFFX-CreX-5_at 14022.98851 P
AFFX-DapX-3_at 1532.267355 P
AFFX-DapX-5_at 208.6476461 P
AFFX-DapX-M_at 894.7782234 P
AFFX-LysX-3_at 303.7286877 P
AFFX-LysX-5_at 108.3565216 P
AFFX-LysX-M_at 125.3946819 P
AFFX-PheX-3_at 175.21872 P
AFFX-PheX-5_at 104.8985665 P
AFFX-PheX-M_at 176.5191194 P
AFFX-r2-Bs-dap-3_at 2644.308495 P
AFFX-r2-Bs-dap-5_at 261.7553908 P

Total number of rows: 32635

Table truncated, full table size 1016 Kbytes.




Supplementary file Size Download File type/resource
GSM701758_Xl_Stage31_1.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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