GEO help: Mouse over screen elements for information.
Status
Public on Sep 12, 2005
Title
Brain_Aged_Salineip_4hr_mouse1 (OP1_#61)
Sample type
RNA
Source name
Mouse brain, Aged, 4hr post saline ip injection
Organism
Mus musculus Characteristics
Strain: In-house BALB/c mice; Gender: Male; Age: 22 months old; Tissue: Brain; Treatment: 4 hours post saline ip.
Extracted molecule
total RNA
Label
Biotin-labeled
Description
The aged mouse was injected intraperitoneal (ip) with saline (~100ul/mouse) and was killed 4 hours after injection by CO2 asphyxiation. Brain was removed, separated in half at the longitudinal fissure, frozen in liquid nitrogen and stored at -80C until use.
Data processing
Scaling was used: All probe sets, target signal 150. Data parameters: Alpha1 (0.05), Alpha2 (0.065), Tau (0.015), Gamma1L (0.002), Gamma1H (0.002), Gamma2L (0.002667), Gamma2H (0.002667), Perturbation (1.1). Algorithm: Statistical, GCOS 1.1.
Submission date
Sep 01, 2005
Last update date
Sep 07, 2005
Contact name
Rodney W. Johnson
E-mail(s)
rwjohn@uiuc.edu, godbout.2@osu.edu, jingchn@uiuc.edu Phone
217-333-2118
Fax
217-333-8286
Organization name
Univ of Illinois in Urbana
Department
Animal Sciences
Lab
Dr. Rodney Johnson's lab
Street address
1207 W. Gregory Dr.
City
Urbana
State/province
IL
ZIP/Postal code
61801
Country
USA
Platform ID
GPL1261 Series (1)
GSE3253 Exaggerated neuroinflammation and sickness behavior in aged mice after activation of the peripheral innate immune system
Data table header descriptions ID_REF
VALUE Scaled signal count data
ABS_CALL The transcript is detected (Present), not detected (Absent) and marginally detected (Marginal)
Data table ID_REF VALUE ABS_CALL AFFX-BioB-5_at
215.5
P
AFFX-BioB-M_at
434.8
P
AFFX-BioB-3_at
249.7
P
AFFX-BioC-5_at
532.4
P
AFFX-BioC-3_at
600
P
AFFX-BioDn-5_at
697.2
P
AFFX-BioDn-3_at
2938.7
P
AFFX-CreX-5_at
7165.1
P
AFFX-CreX-3_at
9655.8
P
AFFX-DapX-5_at
18.8
A
AFFX-DapX-M_at
13.5
A
AFFX-DapX-3_at
26.9
A
AFFX-LysX-5_at
1.2
A
AFFX-LysX-M_at
10.9
A
AFFX-LysX-3_at
11.1
A
AFFX-PheX-5_at
13
A
AFFX-PheX-M_at
0.7
A
AFFX-PheX-3_at
12.6
A
AFFX-ThrX-5_at
17.5
A
AFFX-ThrX-M_at
12
A
45101 810 Kbytes .Supplementary data files not provided
