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GEO accession:
Sample GSM73367
Query DataSets for GSM73367
Status
Public on Dec 01, 2005
Title
AML_INV(16)_LIB4
Sample type
SAGE
Anchor
NlaIII
Tag Count
77604
Tag Length
10
Source name
bone marrow, CD15+ myeloid progenitor cells
Organism
Homo sapiens
Characteristics
Acute Myeoloid Leukemia (AML) patient sample with chromosomal inversion INV(16)
Extracted molecule
total RNA
Description
SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow
Submission date
Sep 06, 2005
Last update date
Nov 19, 2008
Contact name
San Ming Wang
E-mail(s)
swang1@northwestern.edu
Phone
224-364-7491
Fax
224-364-5003
Organization name
ENH Research Institute, Northwestern University
Department
Center for Functional Genomics
Street address
1001 University Place
City
Evanston
State/province
IL
ZIP/Postal code
60062
Country
USA
Platform ID
GPL4
Series (1)
GSE3255
Gene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE
Data table header descriptions
TAG
Ten-base SAGE tag
COUNT
Absolute tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
GTGAAACCCC
1005
12950.36
CCACTGCACT
885
11404.05
AAGCGGCCGC
872
11236.53
GTAAGTGTAC
811
10450.49
CCCATCGTCC
789
10167.00
CCTGTAATCC
715
9213.44
CTAAGACTTC
651
8388.74
GTGAAACCCT
562
7241.89
AAAGCGGCCG
503
6481.62
AAGACAGTGG
503
6481.62
TCTAAAGCGG
453
5837.33
CCAAACGTGT
437
5631.15
GCCTCAGTTC
424
5463.64
CACCTAATTG
420
5412.09
GGATTTGGCC
403
5193.03
GTGACCACGG
403
5193.03
TACCTGCAGA
393
5064.17
GCAAGCCAAC
365
4703.37
CCTAGCTGGA
309
3981.75
ATAATTCTTT
302
3891.55
Total number of rows:
24207
Table truncated, full table size
451 Kbytes
.
Supplementary data files not provided
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