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Sample GSM76659

Query DataSets for GSM76659

Status

Public on Nov 05, 2005

Title

1-11Mu11ksubA_48hrTCL

Sample type

RNA

Source name

MBP Ac1-11 CD4+ TCL 48hr

Organism

Mus musculus

Characteristics

Strain: B10.PL MBP Ac1-11 TCR transgenics
Gender: Female
Tissue: spleen and lymph node
Cell type: CD4+ T cell purified

Extracted molecule

total RNA

Label

biotinylated CTP and UTP

Description

Double stranded cDNA was generated from total RNA extracted from MBP Ac 11-11 activated purified CD4+ T cells. Biotinylated cRNA was manufactured by in vitro transcription and hybridized to the Affymetrix genechip murine Mu11k set according to the manufacturer’s protocols.

Data processing

Affymetrix MAS4.0

Submission date

Sep 30, 2005

Last update date

Nov 04, 2005

Contact name

Lawrence Steinman

E-mail(s)

steinman@stanford.edu

Phone

650-725-6401

Organization name

Stanford University School of Medicine

Department

Neurology and Neurological Sciences

Street address

279 Campus Drive, Rm B002

City

Stanford

State/province

ZIP/Postal code

94305-5316

Country

USA

Platform ID

GPL75

Series (1)

GSE3401

4Y vs 1-11 combined CD4 sort

Data table header descriptions
ID_REF
VALUE	Affymetrix MAS4.0
ABS_CALL	Affymetrix MAS4.0

Data table
ID_REF	VALUE	ABS_CALL
IL2_at	-39	A
IL10_at	1622	P
GMCSF_at	251	A
TNFRII_at	412	P
MIP1-B_at	5163	P
IL4_at	240	P
IL12_P40_at	-326	A
TNFa_at	66	A
TCRa_at	29540	P
AFFX-BioB-5_at	131	A
AFFX-BioB-M_at	395	A
AFFX-BioB-3_at	469	A
AFFX-BioC-5_at	5658	P
AFFX-BioC-3_at	6470	P
AFFX-BioDn-5_at	3941	P
AFFX-BioDn-3_at	10823	P
AFFX-CreX-5_at	22381	P
AFFX-CreX-3_at	28067	P
AFFX-BioB-5_st	-61	A
AFFX-BioB-M_st	-720	A

Total number of rows: 6584

Table truncated, full table size 124 Kbytes.

Supplementary data files not provided