|
| Status |
Public on Nov 01, 2012 |
| Title |
genomic DNA from whole blood_1848345023_73130 |
| Sample type |
genomic |
| |
|
| Source name |
whole blood
|
| Organism |
Homo sapiens |
| Characteristics |
study id number: 73130
classification for analysis: Case_Mutation Pos
gender: Female
race: White
age at blood sample collection: 50
1st diagnosis: Breast
age at 1st diagnosis: 45
2nd diagnosis: Bone
age at 2nd diagnosis: 49
number of 1st degree relatives with breast cancer (sister, mother, daughter).: 3
number of 1st degree relatives with ovarian cancer (sister, mother, daughter).: 0
number of 2nd degree relatives with breast cancer (grandmother, aunt, niece): 0
number of 2nd degree relatives with ovarian cancer (grandmother, aunt, niece).: 0
number of relatives in the family dignosed with breast cancers before age 50: 3
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA samples were extracted from blood specimens and bisulfite treated with EZ DNA Methylation Kit (Zymo Research)
|
| Label |
Biotin
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
Standard Illumina Protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
1848345023_73130
|
| Data processing |
BeadStudio software V3.1.0 (Illumina)
|
| |
|
| Submission date |
Nov 10, 2011 |
| Last update date |
Nov 01, 2012 |
| Contact name |
Michael A. Tainsky |
| E-mail(s) |
tainskym@karmanos.org
|
| Organization name |
Wayne State University School Of Medicine
|
| Department |
Department of Oncology, Molecular Biology and Genetics
|
| Street address |
110 E. Warren
|
| City |
Detroit |
| State/province |
MI |
| ZIP/Postal code |
48084 |
| Country |
USA |
| |
|
| Platform ID |
GPL9183 |
| Series (1) |
| GSE33614 |
Methylation analysis of cancer and control samples. |
|
