|
| Status |
Public on Sep 12, 2024 |
| Title |
D45 [551-0061-8] |
| Sample type |
genomic |
| |
|
| Source name |
Peripheral Blood Mononuclear cell
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: tuberculosis (TB)
cell type: Peripheral Blood Mononuclear cell
treatment: STD treatment
|
| Growth protocol |
PBMCs from venous Blood
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA extarcted using QIAGEN DNA kit
|
| Label |
cy3,cy5
|
| Label protocol |
As instructed by Illumina
|
| |
|
| Hybridization protocol |
Illumina Infinum BeadArray protocol
|
| Scan protocol |
iScan Illumina
|
| Description |
Infinium Methylation EPIC
|
| Data processing |
Minfi package in R
|
| |
|
| Submission date |
Sep 12, 2024 |
| Last update date |
Sep 12, 2024 |
| Contact name |
Abhimanyu - |
| E-mail(s) |
Abhimanyua@uchicago.edu
|
| Organization name |
Baylor College of Medicine
|
| Lab |
DiNardo Lab
|
| Street address |
one Baylor Plaza
|
| City |
Houston |
| State/province |
Texas |
| ZIP/Postal code |
77054 |
| Country |
USA |
| |
|
| Platform ID |
GPL21145 |
| Series (1) |
| GSE277003 |
TCA metabolism regulates DNA hypermethylation in LPS and Mycobacterium tuberculosis–induced immune tolerance |
|
