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Sample GSM86255 Query DataSets for GSM86255
Status Public on Feb 08, 2007
Title CT22;liver;NONE;C57/BL6;37448
Sample type RNA
 
Source name CT22;liver;NONE;C57/BL6;37448
Organism Mus musculus
Characteristics CT22;liver;NONE;C57/BL6;37448
Extracted molecule total RNA
Label biotin
Label protocol Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures except for use of a custom 24-channel fluidics machine
Scan protocol standard Affymetrix procedures
Description Circadian Liver_48hr_gcrma
Data processing gcRMA
 
Submission date Dec 06, 2005
Last update date Feb 08, 2007
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1073
Series (2)
GSE3748 Circadian liver_wt and Clock mutants
GSE3751 Circadian rhythm in clock mutants

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript

Data table
ID_REF VALUE
AFFX-18SRNAMur/X00686_3_at 213.3122
AFFX-18SRNAMur/X00686_5_at 180.8124
AFFX-18SRNAMur/X00686_M_at 84.13658
AFFX-b-ActinMur/M12481_3_at 173910.3
AFFX-b-ActinMur/M12481_5_at 75529.7
AFFX-b-ActinMur/M12481_M_at 57359.23
AFFX-BioB-3_at 2753.871
AFFX-BioB-5_at 2877.913
AFFX-BioB-M_at 7965.387
AFFX-BioC-3_at 9568.791
AFFX-BioC-5_at 7819.863
AFFX-BioDn-3_at 47332.16
AFFX-BioDn-5_at 12274.25
AFFX-CreX-3_at 305620.4
AFFX-CreX-5_at 207056.6
AFFX-DapX-3_at 80.38794
AFFX-DapX-5_at 102.1209
AFFX-DapX-M_at 97.66841
AFFX-GapdhMur/M32599_3_at 204434.8
AFFX-GapdhMur/M32599_5_at 108381

Total number of rows: 31373

Table truncated, full table size 735 Kbytes.




Supplementary file Size Download File type/resource
GSM86255.CEL.gz 4.9 Mb (ftp)(http) CEL

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