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Sample GSM86259 Query DataSets for GSM86259
Status Public on Feb 08, 2007
Title CT30;liver;NONE;C57/BL6;37452
Sample type RNA
 
Source name CT30;liver;NONE;C57/BL6;37452
Organism Mus musculus
Characteristics CT30;liver;NONE;C57/BL6;37452
Extracted molecule total RNA
Label biotin
Label protocol Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures except for use of a custom 24-channel fluidics machine
Scan protocol standard Affymetrix procedures
Description Circadian Liver_48hr_gcrma
Data processing gcRMA
 
Submission date Dec 06, 2005
Last update date Feb 08, 2007
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1073
Series (2)
GSE3748 Circadian liver_wt and Clock mutants
GSE3751 Circadian rhythm in clock mutants

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript

Data table
ID_REF VALUE
AFFX-18SRNAMur/X00686_3_at 168.093
AFFX-18SRNAMur/X00686_5_at 155.4356
AFFX-18SRNAMur/X00686_M_at 79.71273
AFFX-b-ActinMur/M12481_3_at 138032
AFFX-b-ActinMur/M12481_5_at 56440.8
AFFX-b-ActinMur/M12481_M_at 49357.34
AFFX-BioB-3_at 1733.968
AFFX-BioB-5_at 2916.322
AFFX-BioB-M_at 7183.459
AFFX-BioC-3_at 6947.863
AFFX-BioC-5_at 5745.849
AFFX-BioDn-3_at 37004.03
AFFX-BioDn-5_at 10088.08
AFFX-CreX-3_at 254363.3
AFFX-CreX-5_at 213878.2
AFFX-DapX-3_at 80.37931
AFFX-DapX-5_at 101.6636
AFFX-DapX-M_at 96.24073
AFFX-GapdhMur/M32599_3_at 192094.7
AFFX-GapdhMur/M32599_5_at 115401.1

Total number of rows: 31373

Table truncated, full table size 735 Kbytes.




Supplementary file Size Download File type/resource
GSM86259.CEL.gz 5.0 Mb (ftp)(http) CEL

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