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Sample GSM86260 Query DataSets for GSM86260
Status Public on Feb 08, 2007
Title CT34;liver;NONE;C57/BL6;37453
Sample type RNA
 
Source name CT34;liver;NONE;C57/BL6;37453
Organism Mus musculus
Characteristics CT34;liver;NONE;C57/BL6;37453
Extracted molecule total RNA
Label biotin
Label protocol Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures except for use of a custom 24-channel fluidics machine
Scan protocol standard Affymetrix procedures
Description Circadian Liver_48hr_gcrma
Data processing gcRMA
 
Submission date Dec 06, 2005
Last update date Feb 08, 2007
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1073
Series (2)
GSE3748 Circadian liver_wt and Clock mutants
GSE3751 Circadian rhythm in clock mutants

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript

Data table
ID_REF VALUE
AFFX-18SRNAMur/X00686_3_at 199.2007
AFFX-18SRNAMur/X00686_5_at 174.5012
AFFX-18SRNAMur/X00686_M_at 86.30296
AFFX-b-ActinMur/M12481_3_at 123848.6
AFFX-b-ActinMur/M12481_5_at 62342.18
AFFX-b-ActinMur/M12481_M_at 53930.29
AFFX-BioB-3_at 1545.933
AFFX-BioB-5_at 2881.612
AFFX-BioB-M_at 7574.077
AFFX-BioC-3_at 7068.896
AFFX-BioC-5_at 5682.274
AFFX-BioDn-3_at 39850.5
AFFX-BioDn-5_at 12494.19
AFFX-CreX-3_at 314865.3
AFFX-CreX-5_at 253004
AFFX-DapX-3_at 80.86408
AFFX-DapX-5_at 102.7051
AFFX-DapX-M_at 98.09241
AFFX-GapdhMur/M32599_3_at 180585.5
AFFX-GapdhMur/M32599_5_at 127993.5

Total number of rows: 31373

Table truncated, full table size 735 Kbytes.




Supplementary file Size Download File type/resource
GSM86260.CEL.gz 5.0 Mb (ftp)(http) CEL

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