NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM86268 Query DataSets for GSM86268
Status Public on Feb 08, 2007
Title CT50;liver;NONE;C57/BL6;37461
Sample type RNA
 
Source name CT50;liver;NONE;C57/BL6;37461
Organism Mus musculus
Characteristics CT50;liver;NONE;C57/BL6;37461
Extracted molecule total RNA
Label biotin
Label protocol Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures except for use of a custom 24-channel fluidics machine
Scan protocol standard Affymetrix procedures
Description Circadian Liver_48hr_gcrma
Data processing gcRMA
 
Submission date Dec 06, 2005
Last update date Feb 08, 2007
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1073
Series (2)
GSE3748 Circadian liver_wt and Clock mutants
GSE3751 Circadian rhythm in clock mutants

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript

Data table
ID_REF VALUE
AFFX-18SRNAMur/X00686_3_at 270.8912
AFFX-18SRNAMur/X00686_5_at 242.8667
AFFX-18SRNAMur/X00686_M_at 87.99206
AFFX-b-ActinMur/M12481_3_at 106014
AFFX-b-ActinMur/M12481_5_at 36640.63
AFFX-b-ActinMur/M12481_M_at 32135.43
AFFX-BioB-3_at 1975.695
AFFX-BioB-5_at 2862.118
AFFX-BioB-M_at 7539.579
AFFX-BioC-3_at 7179.748
AFFX-BioC-5_at 5940.004
AFFX-BioDn-3_at 44511.96
AFFX-BioDn-5_at 13459.3
AFFX-CreX-3_at 320679.3
AFFX-CreX-5_at 253263.9
AFFX-DapX-3_at 83.18542
AFFX-DapX-5_at 107.8063
AFFX-DapX-M_at 101.4854
AFFX-GapdhMur/M32599_3_at 190512.9
AFFX-GapdhMur/M32599_5_at 97876

Total number of rows: 31373

Table truncated, full table size 735 Kbytes.




Supplementary file Size Download File type/resource
GSM86268.CEL.gz 5.1 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap