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Sample GSM86272 Query DataSets for GSM86272
Status Public on Feb 08, 2007
Title CT58;liver;NONE;C57/BL6;37465
Sample type RNA
 
Source name CT58;liver;NONE;C57/BL6;37465
Organism Mus musculus
Characteristics CT58;liver;NONE;C57/BL6;37465
Extracted molecule total RNA
Label biotin
Label protocol Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures except for use of a custom 24-channel fluidics machine
Scan protocol standard Affymetrix procedures
Description Circadian Liver_48hr_gcrma
Data processing gcRMA
 
Submission date Dec 06, 2005
Last update date Feb 08, 2007
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1073
Series (2)
GSE3748 Circadian liver_wt and Clock mutants
GSE3751 Circadian rhythm in clock mutants

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript

Data table
ID_REF VALUE
AFFX-18SRNAMur/X00686_3_at 195.2269
AFFX-18SRNAMur/X00686_5_at 155.7615
AFFX-18SRNAMur/X00686_M_at 82.10403
AFFX-b-ActinMur/M12481_3_at 137971.8
AFFX-b-ActinMur/M12481_5_at 78060.65
AFFX-b-ActinMur/M12481_M_at 59159.19
AFFX-BioB-3_at 2231.022
AFFX-BioB-5_at 2911.279
AFFX-BioB-M_at 9269.106
AFFX-BioC-3_at 7859.344
AFFX-BioC-5_at 7156.855
AFFX-BioDn-3_at 50820.94
AFFX-BioDn-5_at 13691.74
AFFX-CreX-3_at 385834
AFFX-CreX-5_at 275483.5
AFFX-DapX-3_at 80.26181
AFFX-DapX-5_at 102.9632
AFFX-DapX-M_at 95.95936
AFFX-GapdhMur/M32599_3_at 184739.8
AFFX-GapdhMur/M32599_5_at 127006.7

Total number of rows: 31373

Table truncated, full table size 735 Kbytes.




Supplementary file Size Download File type/resource
GSM86272.CEL.gz 5.0 Mb (ftp)(http) CEL

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