|
| Status |
Public on Sep 01, 2012 |
| Title |
Ewing sarcoma E61 4756083018_R002_C011 |
| Sample type |
genomic |
| |
|
| Source name |
Primary Tumor Sample
|
| Organism |
Homo sapiens |
| Characteristics |
sample group: E61
tissue: primary Ewing sarcoma tumor
|
| Growth protocol |
genomic DNA was extracted and purified from LBC samples using Qiagen DNeasy Kit, then bisulfite treated with EZ DNA Methyation-Gold kit according to standard instructions
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Standard Illumina Protocol
|
| Label |
Cy3 and Cy5
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
4756083018_R002_C011
Bisulfite Treated DNA
|
| Data processing |
BeadStudio software v3.2
|
| |
|
| Submission date |
Mar 27, 2012 |
| Last update date |
Sep 01, 2012 |
| Contact name |
Scott Borinstein |
| E-mail(s) |
scott.c.borinstein@vanderbilt.edu
|
| Organization name |
Vanderbilt University
|
| Street address |
2200 Pierce Ave
|
| City |
Nashville |
| ZIP/Postal code |
TN |
| Country |
USA |
| |
|
| Platform ID |
GPL9183 |
| Series (2) |
|
