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Sample GSM912557 Query DataSets for GSM912557
Status Public on Apr 10, 2014
Title Secreting-GH Pituitary Tumor cDNA SAGE Library
Sample type SAGE
Anchor NlaIII
Tag Count 60727
Tag Length 10
 
Source name Secreting-GH Pituitary Tumors
Organism Homo sapiens
Characteristics tissue: pituitary
source: pool from five secreting-GH pituitary tumor patients
Biomaterial provider University Hospital of School of Medicine of Ribeirão Preto - University of São Paulo
Extracted molecule total RNA
Extraction protocol TRIzol® Reagent
 
Data processing Raw SAGE tags
 
Submission date Apr 10, 2012
Last update date Apr 10, 2014
Contact name Leandro Machado Colli
E-mail(s) leandroc@fmrp.usp.br
Organization name School of Medicine of Ribeirao Preto
Department Department of Internal Medicine
Street address Av Bandeirantes 3900
City Ribeirao Preto
State/province SP
ZIP/Postal code 14049-900
Country Brazil
 
Platform ID GPL4
Series (1)
GSE37153 Pituitary Tumors cDNA SAGE Libraries

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
GACAAGGTCG 8510 140135.36
CTTGGGTGTA 1262 20781.53
GGACAAGGTC 595 9797.95
TCCTTCCTGA 370 6092.84
ATACAGAATA 344 5664.70
CCCATCGTCC 343 5648.23
CGCCGACGAT 335 5516.49
GAGGGAGTTT 277 4561.40
GAGCTGATAG 275 4528.46
ATCTGAAGCA 225 3705.11
CACCTAATTG 220 3622.77
TACAAGGTCG 208 3425.17
TTGGTCCTCT 208 3425.17
ACAAGGTCGA 180 2964.09
GTTGTGGTTA 174 2865.28
TGTTGAATCA 168 2766.48
GTGAAACCCC 164 2700.61
TTCATACACC 160 2634.74
CTGGGCCTGG 157 2585.34
AGCCCTACAA 156 2568.87

Total number of rows: 21490

Table truncated, full table size 400 Kbytes.




Supplementary data files not provided

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