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Sample GSM935834 Query DataSets for GSM935834
Status Public on Jun 01, 2012
Title Mantle cell lymphoma cells sensitive to the drug at start point sample 2
Sample type RNA
 
Source name Mantle cell lymphoma cells sensitive to the drug at start point sample
Organism Homo sapiens
Characteristics cell type: Mantle cell lymphoma
cell line: Jeko
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Biotin
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description Mantle cell lymphoma cells sensitive to the drug at start point sample
Data processing Quantile normalization with variance stabilizing transformation using 'lumi' R package.
 
Submission date May 22, 2012
Last update date Jun 01, 2012
Contact name Samuel McBrayer
E-mail(s) SamuelMcBrayer2011@u.northwestern.edu
Organization name Northwestern University
Street address 303 E Superior
City Chicago
ZIP/Postal code 60611
Country USA
 
Platform ID GPL6947
Series (1)
GSE38145 Integrative Gene Expression Profiling Reveals G6PD-Mediated Resistance to RNA-Directed Nucleoside Analogues in B-Cell Neoplasms

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_1762337 6.63897440071213 81.1802 2.387456 0.8181818 23
ILMN_2055271 6.68447426991482 84.29105 2.921398 0.5256917 18
ILMN_1736007 6.67112198594888 83.35442 2.254225 0.6324111 29
ILMN_2383229 6.70110684980907 85.44167 3.188317 0.4189723 16
ILMN_1806310 6.64812320723074 81.80807 2.462997 0.7747036 22
ILMN_1779670 6.71947363432059 86.69167 2.5906 0.3096179 29
ILMN_2321282 6.70776287943725 85.90694 2.954287 0.370224 26
ILMN_1671474 6.714322814246 86.34428 1.7706 0.3386034 17
ILMN_1772582 6.7287355011466 87.35381 2.574616 0.2753623 27
ILMN_1735698 6.8224356913319 93.43671 3.825084 0.0513834 23
ILMN_1653355 7.02187631019294 105.2961 5.258278 0.006587615 22
ILMN_1717783 6.76059127342295 89.52473 4.097555 0.1488801 21
ILMN_1705025 6.71646917434952 86.49168 2.789238 0.3267457 20
ILMN_1814316 6.73854823246589 88.02658 2.603983 0.2345191 23
ILMN_2359168 6.72718462867026 87.2508 2.373957 0.2832675 24
ILMN_1731507 6.67218569503835 83.43536 4.336106 0.6258234 22
ILMN_1787689 6.77107036567774 90.21655 3.361122 0.1251647 27
ILMN_1745607 6.72629764750889 87.18597 2.823549 0.28722 18
ILMN_2136495 6.76695201878092 89.94147 2.703298 0.1330698 14
ILMN_1668111 6.65099539643378 82.00745 2.523369 0.7615283 22

Total number of rows: 48802

Table truncated, full table size 2835 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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