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Sample GSM93887 Query DataSets for GSM93887
Status Public on Aug 29, 2006
Title Myotubes_rep1, chip HG-U133A
Sample type RNA
 
Source name myotubes
Organism Homo sapiens
Characteristics Fetal skeletal myoblasts
Growth protocol Cultured in SKGM-2 media
Extracted molecule nuclear RNA
Extraction protocol RNA prep method: RNeasy
Label Biotin
 
Scan protocol GeneArray 2500 scanner
Description The goal is to study the genome-wide mapping of histone modifications in differentiating human primary myoblasts.
Data processing MicroArray Suite 5.0
 
Submission date Jan 26, 2006
Last update date Aug 29, 2006
Organization Ottawa Hospital Research Institute
Phone (613) 737-8899 -73255
Department Cellular and Molecular Medicine
Lab Ottawa Bioinformatics Core Facility
Street address 501 Smyth Rd.
City Ottawa
State/province ON
ZIP/Postal code K1H 8L6
Country Canada
 
Platform ID GPL96
Series (2)
GSE4131 Determination of myotube and myoblast expression levels
GSE4133 The Genome Wide Distribution of Acetylated Histone H4 Remodelled through Human Primary Myoblast Differentiation

Data table header descriptions
ID_REF
VALUE signal intensity
ABS_CALL present or absent call
DETECTION P-VALUE p-value for absent/present

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 5278.3 P 0.000340
AFFX-BioB-M_at 10919.1 P 0.000044
AFFX-BioB-3_at 6774.2 P 0.000052
AFFX-BioC-5_at 13749.5 P 0.000060
AFFX-BioC-3_at 9264.2 P 0.000052
AFFX-BioDn-5_at 10525.8 P 0.000044
AFFX-BioDn-3_at 53551.0 P 0.000044
AFFX-CreX-5_at 124411.6 P 0.000044
AFFX-CreX-3_at 173594.2 P 0.000044
AFFX-DapX-5_at 21972.3 P 0.000044
AFFX-DapX-M_at 153476.3 P 0.000044
AFFX-DapX-3_at 191342.8 P 0.000044
AFFX-LysX-5_at 18863.5 P 0.000044
AFFX-LysX-M_at 95508.9 P 0.000044
AFFX-LysX-3_at 168150.4 P 0.000044
AFFX-PheX-5_at 6557.5 P 0.000044
AFFX-PheX-M_at 13848.3 P 0.000044
AFFX-PheX-3_at 84517.1 P 0.000044
AFFX-ThrX-5_at 1662.1 P 0.000390
AFFX-ThrX-M_at 3599.2 P 0.000060

Total number of rows: 22283

Table truncated, full table size 612 Kbytes.




Supplementary file Size Download File type/resource
GSM93887.CEL.gz 3.2 Mb (ftp)(http) CEL
GSM93887.EXP.gz 507 b (ftp)(http) EXP

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