|
| Status |
Public on Mar 13, 2014 |
| Title |
genomic DNA from Sample 73 |
| Sample type |
genomic |
| |
|
| Source name |
Prostate
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: Prostate Cancer
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted from the paraffin embedded tissues using Qiagen DNeasy Kit according to standard instructions.
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina GoldenGate array using standard Illumina protocol.
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting.
|
| Description |
Prostate Cancer Sample
|
| Data processing |
Illumina GenomeStudio
|
| |
|
| Submission date |
Jul 24, 2012 |
| Last update date |
Mar 13, 2014 |
| Contact name |
Liang Goh |
| E-mail(s) |
liang.goh@duke-nus.edu.sg
|
| Organization name |
Duke-NUS graduate medical school
|
| Street address |
College Road
|
| City |
Singapore |
| ZIP/Postal code |
169857 |
| Country |
Singapore |
| |
|
| Platform ID |
GPL9183 |
| Series (1) |
| GSE39603 |
Diagnostic and prognostic utility of a unique epigenetic prognostic PHYMA signature in prostate cancer |
|
