|
| Status |
Public on Aug 13, 2012 |
| Title |
camta1 root drought,biological replicate 2 |
| Sample type |
RNA |
| |
|
| Source name |
Arabidopsis Thaliana mutant root in drought condition
|
| Organism |
Arabidopsis thaliana |
| Characteristics |
tissue: root
cultivar/ecotype: camta1
|
| Treatment protocol |
Plant sample collected under water and drought condition
|
| Growth protocol |
1 month old Arabidopsis plant
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA isolated from plant total RNA sigma kit
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 250 ng total RNA.
|
| |
|
| Hybridization protocol |
According to affymatrix gene chip instruction manual using Fluidisc station 450.
|
| Scan protocol |
GeneChips were scanned using Affymatrix gene chip scanner.
|
| Description |
Arabidopsis Thaliana mutant root in drought condition
|
| Data processing |
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
|
| |
|
| Submission date |
Aug 12, 2012 |
| Last update date |
Aug 15, 2018 |
| Contact name |
samir v sawant |
| E-mail(s) |
samirsawant@nbri.res.in
|
| Phone |
+91-522-2297947
|
| Fax |
+91-522-2205839
|
| Organization name |
national botanical research institute
|
| Department |
CPMB & GE
|
| Street address |
rana pratap marg
|
| City |
lucknow |
| ZIP/Postal code |
226001 |
| Country |
India |
| |
|
| Platform ID |
GPL198 |
| Series (1) |
| GSE40061 |
Role of CAMTA1 gene under drought stress |
|
| Relations |
| Reanalyzed by |
GSE118579 |
