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Sample GSM99213 Query DataSets for GSM99213
Status Public on Mar 08, 2006
Title Ecoli_Stationary phase in LB T3
Sample type mixed
 
Channel 1
Source name Escherichia coli MG1655 genomic DNA
Organism Escherichia coli
Characteristics Escherichia coli MG1655 genomic DNA
Extracted molecule genomic DNA
Label Cy3
Label protocol Labeling of DNA using DNA polymerase (Klenow fragment)
 
Channel 2
Source name Escherichia coli MG1655, Stationary phase in LB OD 3.1
Organism Escherichia coli
Characteristics Escherichia coli MG1655, Stationary phase in LB OD 3.1
Extracted molecule total RNA
Label Cy5
 
 
Description Stationary phase in LB, OD 3.1

Ecoli MG1655, stationary phase in LB vs genomic DNA
Data processing Normalized log (2) ratio of Cy5/Cy3, normalized using lowess
 
Submission date Mar 07, 2006
Last update date Mar 07, 2006
Contact name Dipen Sangurdekar
E-mail(s) dps@genomics.princeton.edu
Organization name Princeton University
Department Lewis-Sigler Institute for Integrative Genomics
Street address 132 Carl Icahn laboratory, Princeton University
City Princeton
State/province NJ
ZIP/Postal code 08544
Country USA
 
Platform ID GPL3503
Series (1)
GSE4380 Stationary phase in LB, genomic DNA reference

Data table header descriptions
ID_REF
VALUE Normalized log (2) ratio of Cy5/Cy3

Data table
ID_REF VALUE
1 0.05338
2 -1.327
3 -0.4627
4 -0.7186
5
6 -0.9284
7 -0.9684
8 1.154
9 -0.5025
10 -1.881
11 -0.6919
12 -0.4364
13 -0.7401
14 1.969
15 0.6283
16 -2.557
17
18 -0.4058
19 -0.2574
20 -0.5153

Total number of rows: 4405

Table truncated, full table size 50 Kbytes.




Supplementary data files not provided

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