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    LOC101885129 uncharacterized LOC101885129 [ Danio rerio (zebrafish) ]

    Gene ID: 101885129, updated on 27-Mar-2024

    Summary

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    Gene symbol
    LOC101885129
    Gene description
    uncharacterized LOC101885129
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    nitr1; nitr2
    Orthologs
    all
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    Genomic context

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    See LOC101885129 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (17496474..17522181)
    105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (17268242..17270208)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene si:busm1-186f8.12, pseudogene Neighboring gene si:busm1-186f8.13, pseudogene Neighboring gene novel immune-type receptor 1k Neighboring gene si:busm1-219h16.18, pseudogene Neighboring gene putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8 Neighboring gene novel immune-type receptor 1h Neighboring gene novel immune-type receptor 1l

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Developmental and tissue-specific expression of NITRs. Yoder JA, et al. Immunogenetics, 2010 Feb. PMID 20012603, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: uncharacterized protein LOC101885129
    Names
    novel immune-type receptor 1
    novel immune-type receptor 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      17496474..17522181
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021478129.1 → XP_021333804.1  LOW QUALITY PROTEIN: uncharacterized protein LOC101885129

      UniProtKB/TrEMBL
      A0A8M9Q9D1
      Conserved Domains (2) summary
      pfam07686
      Location:354 → 454
      V-set; Immunoglobulin V-set domain
      cl11960
      Location:47 → 146
      Ig; Immunoglobulin domain
    Nucleotide Protein Strain
    Heading Accession and Version

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